Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001762 |
Symbol | |
ID | 8555391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 146490 |
End bp | 148352 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646404755 |
Product | hypothetical protein |
Protein accession | YP_003284390 |
Protein GI | 262392536 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTGAGG GGTTAGAGGC CCACGGAAGA ATTGTCACTG ATGATTACAC CTCAAACTGT TTTTACGATT GTGGAGACAT TCGTGATTTA TCGATGTCTT TCAAATATCA GGTTCCTAAC TTTTGGGGGG CGGAGAATCT AGACTTTGCT TTGGGTATTC AGGACTTGGG AGGGGCTGGT AACCAGTTCA GTACTAAATA TGCGGTCGCG GACTACTCTT TCGACTTTGC TCCAGTTCGA GTGTCGGCAG GCTACGGGCT TTCTGATATC GAATTGGGTG TAATGGATGG CCCATTCGGT GGTATTGAGT ATCAACCATT GAGCTTTTTA CAGGTCAGTG GGGAATACGA TGCTGTGGAG TTCAACTCAT CGGTGAAACT TTTTACCCCA CAAGGCACAC TGCCTTATGA TGTGACAGCT TCGCTAAGTT ATCAGCTATA TTCAGGCCAC AATACAGATG AGCAAAATAT CTGGAACGCA GCACTTTCAG TACCGTTAGT CACCGGGTAC ACGCGTTCTC GCGATTACTC TCGCAATAAT GTCACGTTGA TGGAAAGGTT GTCTTTGGAG CAGAAGAAAG CCAAAGAGGC TTCTATCTCT ACTTTGGTGA GCACGCTTCG TAATGAAGGC TTCGTGAATA TTCAAATTGG TCTGTTGAAC CAAACGACGG TAGTTGCGCT AGAAAACCGT CGTTATAACC ATAACCAGGT TGACGGTTTA GGTGTTGCGA TGGGGATCAT CTCTAGCCAC CTAGGTCAAA ATGCCGTATC AGAAGTGGGC GGTGAGTCGG AGCGCATTGA GCTAATTATG CTCGCAAACC AAAAGCCTGT TGTTAGTGTG CAAGCGAATT CGTCTTGTTA TCAAAGTTTT ATCAATGGTT CTGCTGCGTG CGAGGATATT AAGTTCACGA CACGAGATTT AGCCGAGAAA CTTGAGCTGG TTAATTGGAA AACAGAGCGC GTAAATAGCG GTGTACTAGA CTCTCAACTT GTTTTTTCAC CTATGGTTCG CCATGCCGTT GCGACAGAGT TTGGGGTCTA TGACTACTCT TTTGCCATGT CGAGCAACTT ATATACGTAT CTTTGGCCTG GTGCCGCTGT CGATGTTCGC CATATTCTGC CGTTAGCAGA AAGTGACGAT TATGAAAAAT GGGGATACTT TGAGGATAGC GCGTACGAGA ATGATATCGA GCGCGCAATG TTGCATCAAT TCTTCCGTTT GCCTTATGTC GATATCGCGA ACCAAGTATC CGTCGGTTTG GCGAAAACAG ATTATATTGG CGCGAGAAGT GAATCAACAT GGTTTTCTCA GTCCGGTGCG CATGCCTTTA GCTTAGAAAT GAGTTATTTC CAGCACGTTG ATGAGAAAGA TGAAAATGGA TACGAGACTC TCGATCGTCA AACTTCGCTA GCTCGTTATA CTTTCTCAAT GCCTGAATGG GATTGGCAGT TTAACGCGAC AGCGGGTGAG TTTTGGCGGG GTGATGTCGG TGCCAAGCTA ACAACCTCTC ATTGGTTTGA GGATATTGAG GTTTCCGCTA CTTATCAGGT TACTAAGTAC AAAGATACTG ATGAAGAGCA GTTTGTGGCT GTTTCAGTCA AGCTACCATT AACACCTTGG CGCGATATGT CTCCTGGTTT GTTGCAGGTT CGAGGCAACG AGGCCTATGA CTTTAATGTG ATGACACGAG TAGGCAATGA TGTGAATTAC TTAAGTGATG GACAAGGTGA TGAGCTTATC ATGGACAACA GCATGCTACG TCGTTACTTC AACCGTGGCC GCTATGGTAG TGATTACTTT GAAGAGAATA AGATTCGCTT ACGTAATGCC TACCTGCGTT ACCTATCAAC TCAGTTAGAC TAA
|
Protein sequence | MLEGLEAHGR IVTDDYTSNC FYDCGDIRDL SMSFKYQVPN FWGAENLDFA LGIQDLGGAG NQFSTKYAVA DYSFDFAPVR VSAGYGLSDI ELGVMDGPFG GIEYQPLSFL QVSGEYDAVE FNSSVKLFTP QGTLPYDVTA SLSYQLYSGH NTDEQNIWNA ALSVPLVTGY TRSRDYSRNN VTLMERLSLE QKKAKEASIS TLVSTLRNEG FVNIQIGLLN QTTVVALENR RYNHNQVDGL GVAMGIISSH LGQNAVSEVG GESERIELIM LANQKPVVSV QANSSCYQSF INGSAACEDI KFTTRDLAEK LELVNWKTER VNSGVLDSQL VFSPMVRHAV ATEFGVYDYS FAMSSNLYTY LWPGAAVDVR HILPLAESDD YEKWGYFEDS AYENDIERAM LHQFFRLPYV DIANQVSVGL AKTDYIGARS ESTWFSQSGA HAFSLEMSYF QHVDEKDENG YETLDRQTSL ARYTFSMPEW DWQFNATAGE FWRGDVGAKL TTSHWFEDIE VSATYQVTKY KDTDEEQFVA VSVKLPLTPW RDMSPGLLQV RGNEAYDFNV MTRVGNDVNY LSDGQGDELI MDNSMLRRYF NRGRYGSDYF EENKIRLRNA YLRYLSTQLD
|
| |