Gene VEA_001748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001748 
Symbol 
ID8555377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp135158 
End bp135628 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content52% 
IMG OID646404741 
ProductATP-dependent protease HslV 
Protein accessionYP_003284376 
Protein GI262392522 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.906406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGTA ATGCGCGCAA AGTTCGCCGC TTATATAACA ACCAAGTACT AGCGGGCTTT 
GCTGGCGGCA CTGCGGATGC CTTCACCCTT TTTGAGCGCT TCGAAAGCAA GCTGCAAATG 
CACCAAGGCC ACCTAACTAA GGCTGCGGTT GAGCTAGCCA AAGACTGGCG TAGCGATCGT 
GCTCTGCGCA AGCTCGAAGC CTTGCTTGCC GTTGCCGACG AAACCGCATC GTTAATCATT 
ACCGGTAATG GTGATGTCGT ACAGCCAGAA CACGACCTGA TTGCGATTGG CTCTGGTGGT 
GCTTACGCAC AAGCTGCAGC AACCGCCCTA CTAGAAAACA CAGATCTAGA TGCTCGTGAG 
ATCGCGGAAA AAGCCCTCAA CATCGCGGGT GATATTTGTG TCTTCACCAA CCACCACCAC 
ACAGTAGAAG AGCTAGACTC AACGGTAGAG CCTGAAAAAC CAACCGCGTA A
 
Protein sequence
MKGNARKVRR LYNNQVLAGF AGGTADAFTL FERFESKLQM HQGHLTKAAV ELAKDWRSDR 
ALRKLEALLA VADETASLII TGNGDVVQPE HDLIAIGSGG AYAQAAATAL LENTDLDARE 
IAEKALNIAG DICVFTNHHH TVEELDSTVE PEKPTA