Gene VEA_001727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001727 
Symbol 
ID8555356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp122020 
End bp122553 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID646404720 
ProductLSU ribosomal protein L6p (L9e) 
Protein accessionYP_003284355 
Protein GI262392501 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000194026 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTG TTGCAAAAGC ACCTGTCGCT ATTCCAGCTG GCGTAGAGGT GAAACTAAAC 
GGCCAAGAAA TCACTGTAAA AGGTGCGAAA GGCGAACTAA CTCGCGTTCT TAACGATGCA
GTTGTAATCG CTCAGGAAGA AAATAACCTG ACTTTCGGTC CTAAAGAAGG TGTTGCTAAC
GCATGGGCTC AAGCAGGTAC TGCTCGCGCT CTAGTTAACA ACATGGTTGT TGGTGTTACT
GAAGGCTTTA CTAAGAAGCT AACTCTTAAA GGTGTAGGTT ACCGTGCTGC TATCAAAGGC
AACGCTGTAG GTCTAACACT AGGCTTCTCA CACCCAGTTG AGCACGAGTT GCCAGCGGGT
ATTAAAGCTG AATGTCCAAG CCAAACTGAA ATCGTGATCA CTGGTGCTGA CAAGCAACTA
GTTGGTCAAG TTGCGGCTGA CATTCGTTCT TACCGTGAGC CTGAGCCATA CAAAGGCAAA
GGTGTTCGTT ACGCAGATGA AAATGTGCGT ACTAAAGAAG CTAAGAAGAA GTAA
 
Protein sequence
MSRVAKAPVA IPAGVEVKLN GQEITVKGAK GELTRVLNDA VVIAQEENNL TFGPKEGVAN 
AWAQAGTARA LVNNMVVGVT EGFTKKLTLK GVGYRAAIKG NAVGLTLGFS HPVEHELPAG
IKAECPSQTE IVITGADKQL VGQVAADIRS YREPEPYKGK GVRYADENVR TKEAKKK