Gene VEA_001726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001726 
Symbol 
ID8555355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp121657 
End bp122010 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content51% 
IMG OID646404719 
ProductLSU ribosomal protein L18p (L5e) 
Protein accessionYP_003284354 
Protein GI262392500 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000014236 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA AAGCATCTCG CATCCGTCGT GCTACACGTG CACGTCGTAA GATTGCAGAA 
CTGGGTGCGA CTCGCCTAGT TGTACACCGT ACTCCTCGTC ACGTGTACGC ACAGGTTATC
GCGGCTAACG GCTCTGAGGT TATCGCAGCA GCTTCTACTG TAGAAAAAGC GATCCGTGAG
CAAGTGAAAT ACACTGGTAA CGTTGATGCA GCTAAAGCAG TGGGTAAAGC TATTGCTGAG
CGCGCTCTTG AGAAGGGCGT AACTGCAGTT GCATTTGATC GTTCTGGTTT CCAATACCAC
GGTCGAGTAG CGGCGCTAGC AGAATCTGCT CGCGAAGCTG GTCTGAAATT CTAA
 
Protein sequence
MDKKASRIRR ATRARRKIAE LGATRLVVHR TPRHVYAQVI AANGSEVIAA ASTVEKAIRE 
QVKYTGNVDA AKAVGKAIAE RALEKGVTAV AFDRSGFQYH GRVAALAESA REAGLKF