Gene VEA_001720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001720 
Symbol 
ID8555349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp118502 
End bp118858 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content47% 
IMG OID646404713 
ProductSSU ribosomal protein S13p (S18e) 
Protein accessionYP_003284348 
Protein GI262392494 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000208001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGTA TAGCAGGCAT TAACATTCCT GATCAGAAAC ATGCAGTAAT CGCTCTAACA 
GCGATCTACG GCATCGGTAA AACTCGCTCT CAAGCTATCC TAGCTGAAGT GGGTATTGCT
GAAAATGTTA AGATCAGTGA ACTAACTGAA GAGCAGATCG ATCAACTGCG TGATGGTGTA
GCTAAGTACA CTGTAGAAGG TGATCTACGT CGTGAAGTAT CTATGAACAT CAAGCGTCTT
ATGGACCTTG GCTGTTACCG TGGTCTTCGT CATCGTCGCA GTCTACCACT ACGTGGACAG
CGTACTAAAA CCAACGCTCG CACCCGTAAG GGTCCGCGTA AGCCGATCAA GAAATAA
 
Protein sequence
MARIAGINIP DQKHAVIALT AIYGIGKTRS QAILAEVGIA ENVKISELTE EQIDQLRDGV 
AKYTVEGDLR REVSMNIKRL MDLGCYRGLR HRRSLPLRGQ RTKTNARTRK GPRKPIKK