| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001711 |
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| Symbol | |
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| ID | 8555340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 111734 |
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| End bp | 113113 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646404704 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_003284339 |
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| Protein GI | 262392485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.177181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAAAC AAACTTTTGA TCAAGTCGGG CTAAACCCAG CGTTACTCGC CACACTTGAT
TCCCTGAACT ACACCCACAT GACGCCAATT CAAGCTTTGA GTTTGCCTGC AATCCTAAAA
CATCGTGATG TCATCGGGCA GGGTAAAACG GGCTCAGGTA AAACCGCTGC ATTTGGTTTG
GGTGTTTTAT CGAACCTTAA CGTCAAACGC TTTCGTGTCC AGTCATTAGT ATTGTGTCCA
ACTCGTGAGC TTGCGGATCA AGTCGCGAAG GAAATTCGTA CTTTAGGTCG TGGCATTCAT
AATATTAAAG TGCTTACTCT CTGCGGTGGG ATGCCAATGG GGCCACAAAT TGGTTCTCTG
GAGCATGGCG CGCATATCTT AGTCGGCACA CCTGGCCGTA TTTTGGATCA CCTTGAGAAA
GGCCGAATTA ACCTGAGCGA GCTGAATACC TTGGTGCTGG ACGAAGCTGA TCGCATGTTG
GACATGGGTT TCCAAGACGC ATTAGATGCG ATTATTGATG CAGCGCCAAA GCAGCGTCAA
ACTCTACTTT TCAGTGCTAC TTTCCCAGAG AAAATTGAGC AAATTGCGCA GCGTATTATG
CAGACGCCTG AAGTCATTAA GGTGGAATCG ACTCATGATA CCTCAAGCAT TGCTCAGCAT
TTCTACAAAG TTGAAGGTTC GGAAGCGCGT GATGAAGCGT TGGCGAACTT GCTACTGACT
CACCAACCAG AGTCCGCTGT GGTTTTTTGC AATACCAAAA AAGAAGTGCA AAGTGTCGCA
GATGAGTTGC ATCGCAAAGG GTTCAGCGTT ATCGATATCC ATGGGGACTT AGAACAGCGT
GAACGCGATC AAGCATTGGT GCAGTTTGCT AACAAGAGTG TTTCTATCCT TGTCGCAACA
GACGTCGCGG CGCGTGGTTT GGACGTAGAT AACCTTGATG CAGTCTTTAA CTTTGAGCTA
TCGCGCGATC CTGAGGTTCA TGTACACCGT ATTGGTCGTA CAGGTCGTGC GGGTAGTAAA
GGTTTAGCGT TCAGCTTTTT TGGTGAGAAA GACGGTTTAC GTGTAGCTCG TATTGAAGAA
TACCTAGAGA TGGACGTGGT ACCAGCAACA TTGCCTGCCA AATCAAATCA GCAGCCATAC
CAAGCGAAGA TGGTGACGAT TAACATTGAT GGCGGTAAGA AACAGAAAGT ACGACCGGGT
GATATCTTAG GGTGTCTGAC GGGGAAAAAT GGTATCCCAG GCTCTCAAGT TGGCAAGATT
CACCTGTTCC CGATGCGCGC CTACGTTGCG GTCGAGAAGT CAGCTGCCAA AAAGGCTCTA
CAAACCATTA GTAATGGCAA GATGAAAGGG CGTCAGTTCC GGGCGCGGCT TCTTAAATAG
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| Protein sequence | MSKQTFDQVG LNPALLATLD SLNYTHMTPI QALSLPAILK HRDVIGQGKT GSGKTAAFGL
GVLSNLNVKR FRVQSLVLCP TRELADQVAK EIRTLGRGIH NIKVLTLCGG MPMGPQIGSL
EHGAHILVGT PGRILDHLEK GRINLSELNT LVLDEADRML DMGFQDALDA IIDAAPKQRQ
TLLFSATFPE KIEQIAQRIM QTPEVIKVES THDTSSIAQH FYKVEGSEAR DEALANLLLT
HQPESAVVFC NTKKEVQSVA DELHRKGFSV IDIHGDLEQR ERDQALVQFA NKSVSILVAT
DVAARGLDVD NLDAVFNFEL SRDPEVHVHR IGRTGRAGSK GLAFSFFGEK DGLRVARIEE
YLEMDVVPAT LPAKSNQQPY QAKMVTINID GGKKQKVRPG DILGCLTGKN GIPGSQVGKI
HLFPMRAYVA VEKSAAKKAL QTISNGKMKG RQFRARLLK
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