| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001693 |
|---|
| Symbol | |
|---|
| ID | 8555322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 90335 |
|---|
| End bp | 94099 |
|---|
| Gene Length | 3765 bp |
|---|
| Protein Length | 1254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646404686 |
|---|
| Product | uncharacterized protein YtfN |
|---|
| Protein accession | YP_003284321 |
|---|
| Protein GI | 262392467 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA TGATGTTTAA GTGGACCAAA TGGCTGTCGC TAAGTTTGAT TGGTCTATTG
CTGTTGCTCA TCATTTTTGT TGCGACAGTG CTATTTACTC ACCCTGGTCT TAAGCTCGCG
TTGTGGGGAG CAGAAAAGGC TTTACCGCAA CTACAGATAG AGAAAGTTCA GGGTTCATTA
TTTCCTCGTT TTGAGCTACA GAACGTCAGT TTTGTCGACG AATCTTTGAA CATCGACGCA
AAAGTCGATC GTTTAGCGTT AGCGGTTAAC TTCCGTTGTT TCTTTGATCC TAAAGTCTGT
GTCGATGAGC TAACCCTGCA AGGTGTTAAC TTTCAGATGC CAGAGCTCCC TCCGGCAGGC
GAAGAGCCAG AGGAGACTCC GCCATTACGT ACAGTCAGTA CACCAGTCCC TATTTTTGTT
AATAAGGTCA GTTTTGATGA CATTAACTTA AACATTTTAG GCAACCAAAT TGACTGGCAA
GATTTCTCTA CCGGGCTTTC TATGCAAGGC GACCGTTTAG TGATTGCGCC GACGGCATTA
AAAGACATCA ATGTTGCATT GGCTCCAAGT GAAGCTGAAC CTGAAGCGGC CACAGACGAG
CCGAAAGACG CTGACGCTCC GCCGCAAGAT ATTGTGTTAC CCGAGGTGTG GATTCCACTC
ACTGTGGAAG CACGACGCCT CGATATTCAT AACTTCAAGC TTGCAGGTGA GAAGCCGGTG
ATCGTTCACC ACCTTGGTGT TGTAGCGAAA GCGGGGGGCG ACCGTGTTGA TGTGAAAACA
TTAGAGCTCG ATATGCCTGA AGTGGAAGGT AAGTTAAGCA CGCAAGTAAC GCTTTCTGCT
GACTATCCTC TCAAAGCACA GCTCGATGCG CTGGTGAAGC AAGCGGATGC GAAGGGACAA
AAGCTGTCGC TGTCAGCTGC TGGTTCGGTG GGAGACCTTT CTCTCACTGC GACCTTATCT
GAACTAGTCG AAGCGGAGAT CAAAGGTGAA CTTCAGCCCC TGAAAGCGCA GTTCCCCTTT
GATGTTGCAA TCAAAAATGT GCAAGCGCAA TGGCCGTTAA TCGGTCAAAG TGATTATCAA
GTATCGGTAC CAAGTTTATC TGCAAAAGGT TCCCTGGACG GATACACTGT GGCACTAGAA
ACACAAGCTT CGGGTAAAGA TATTCCTGCT GTAGATGTTG CACTAAACGG CAAAGGCACA
TTAGAGCAAA TCGATCTTGA AAGCCTGGTA GTCAAAACAT TGGGCGGTGA GCTATCCGGT
CAGGTGATGG CGAATTGGGC TGCGCCAATC AACTGGCAAG CTGACCTTAA TTTGCAACAT
ATTCAACCAG GGCTTCAATG GGAAGAAGCG GAAGGCGATA TCAGTGGTAG CCTCTCGACT
TCAGGTTCTT TAACAGAACA AGGCGGTTGG CAAGTCAGTT TACCTAAGTT AGATATCGAT
GGCATTTTGC GCGGTTATCC GCTGAATGTG GAAGGCCAAC TGGAAGCGTC TGATAAGAAT
GGCAAAGGTG AAGACATTCA GCTTACCACA CAAGGTTTAG CGCTTTCTCA TGGCCCTAAC
CAATTGAGTG CCAAGGGTAA GATTGATAAG CAGATATTAA TGGATGTTGA GGTTAACTTC
CCCGATTTTG CGAAAAGTGT TCCAGATCTA GCGGGTAAGA TGCAAGGCAA CGTGGCGCTG
CGTGGTAGCT TGAAAGAGCC TGACATCAAA TTAGACCTAG CGCTAAATCA AGTGAACTGG
CAGCAGCAAG CGAACGTCGA AAACATAACT TTGAAGGGGG ATGTGACGCC TCTGCCAGCA
CCGAAAGCGA ACTTAAGCCT CATTGCGAAC AACATTACCT ACGACGACAT TAAAGTTGAT
AGTGCAGACC TTGAAGTTTC TGGGGATGAA AAACTGCACC AACTGACGCT AGATGTGGTG
TCTGACATTG TATCAACCAG CTTAGAAATT GAAGGCTCAT TCATACAGAA GCCGCAAATG
ATCTGGGATG GTGCATTGCG TCGTCTTACT TTGAGCACGC CGCAGGGACC TTGGGCGTTG
CAGAAATCGA CGGCGGTTAA AGTCAACATT GATAAACAAA TCGCTGATGT TCAAGCACAT
TGTTGGCTGC AAGCCAATTC GAGTGTTTGT TTGACCGAAG ATATTAGTGT TGGTCAAAGT
GGCGAAGCCA AGTTAGCTGT GAACGACTTT GACTTTGAAC AAATCAAGCA GTTCCTGCCG
CCAGAGACGA AATTACAAGG GTCGGTCAAC GCGCAAGCAA CAGCAAAATG GGCACCAGAG
ATGAAGCCGG AAGTCACGGT GAACGTTGAT ATGCCTAAAG GTCAAGTAGA GCAAGCACTA
GAGCAGCCGA TAACTCTTGG TTGGGAAAGC TTTAGCTTTA AAGCGGCGCT GGCAAAAGAC
AAGTTAGATG CTGAGTGGTT ATTTGATGTG AGAGACAACG GTGACTTATC AGGTCAGGTT
TCTTTGGTCG ATGTAACGTC TGAGCAGCCT GAGATTGACG GTAAGGTCTC GCTATCGACA
TTCCATCTGG ATTTCTTAGC GCCGTTGATA GGTGAGTACA GCCTATTCAA AGCGAACATG
AATACTGATT TGGCGATATC TGGTGATGTT ATGCACCCTA AGGTCAACGG TCAGTTCTTG
ATTGAGCAAA TGAAGCTACA AGGTGAAGTC ACGCCGATAG ACATTAACTC CGGTCAGGTC
GCGATCAACT TTAAAGGTCA CCAAGCGGAT CTTGATGCGG GTATCATGAC GCCAGATGGT
GAGTTGGAAG TGACTGGTGA GGCCGATTGG CAGGATCTAC AAAATTGGCA TACCAAAGCG
CGCGTATTTG CGAAAGAGCT TCAGGTGGAT CTTCCACCAA TGGTAAAAAT CAAAGTTGAG
CCGGACATGA CCATTGATGT CACACCACAG CTTGCTAAGG TCGAAGGTAA TATTAATCTG
CCTTGGGGAC GAGTTGTGGT TGAAGAGCTG CCACCAAGTG CGGTTGGTGT TTCAAGCGAC
ACCGTGATTT TGGACCAGAA CTTACAGCCT GTGAGTGATA TCGAGCCAAT GCCATTTGAT
GTTGAAACGG ATATCAACAT TAAGATCGGT GATGACTTTC AACTGGCCGC CTTTGGTTTG
AAAGGTGGTC TGAAAGGTAA CCTCAATGTG ACACAGAAAG ATAAAGGTCC GTTCATCGTT
GGTGAGGTTA ATATCGTCGA CGGTTCTTAC CGCTCTTTTG GTCAGGATTT GGTGATTGAA
GAAGGTAAGA TCTTAATGAA TGGTCCGGCA GATCAGCCGT ACGTTTCTAT TAAGGCGATT
CGAAATCCAG ATAATACCCA AGATGACGTG ATTGCTGGTG TGCGTGTAAC AGGACCAGCA
TCGGATCCAA ATGTGGAGAT ATTCTCTGAG CCAGCGATGC CTCAAGCGAA TGCGCTCTCT
TACCTACTTC GCGGTCAAGA CATTGATGGC GAAGCGGGAG GCAATGCTAT GACGACCACG
TTGATCGGCC TAAGTTTGGC AAAGAGTGGA CGCGTGGTTG GTGAAATCGG CGAAGCCTTT
GGGGTTCAAG ATTTACAATT GGATACGGCG GGGTCGGGCG ATGATTCTCA AGTGACCGTC
AGTGGTTATA TTCTGCCGGG ATTACAGGTG AAATACGGCG TCGGCATCTT TAACTCACTA
GGCGAGTTCA CCGTGCGTTA TCGATTGATG CAAGATCTGT ATTTAGAGGC GGTTTCTGGT
GTAGATAGTG CGGTTGACCT ACTCTATCAA TTTGAGTTCG ATTAG
|
|---|
| Protein sequence | MIKMMFKWTK WLSLSLIGLL LLLIIFVATV LFTHPGLKLA LWGAEKALPQ LQIEKVQGSL
FPRFELQNVS FVDESLNIDA KVDRLALAVN FRCFFDPKVC VDELTLQGVN FQMPELPPAG
EEPEETPPLR TVSTPVPIFV NKVSFDDINL NILGNQIDWQ DFSTGLSMQG DRLVIAPTAL
KDINVALAPS EAEPEAATDE PKDADAPPQD IVLPEVWIPL TVEARRLDIH NFKLAGEKPV
IVHHLGVVAK AGGDRVDVKT LELDMPEVEG KLSTQVTLSA DYPLKAQLDA LVKQADAKGQ
KLSLSAAGSV GDLSLTATLS ELVEAEIKGE LQPLKAQFPF DVAIKNVQAQ WPLIGQSDYQ
VSVPSLSAKG SLDGYTVALE TQASGKDIPA VDVALNGKGT LEQIDLESLV VKTLGGELSG
QVMANWAAPI NWQADLNLQH IQPGLQWEEA EGDISGSLST SGSLTEQGGW QVSLPKLDID
GILRGYPLNV EGQLEASDKN GKGEDIQLTT QGLALSHGPN QLSAKGKIDK QILMDVEVNF
PDFAKSVPDL AGKMQGNVAL RGSLKEPDIK LDLALNQVNW QQQANVENIT LKGDVTPLPA
PKANLSLIAN NITYDDIKVD SADLEVSGDE KLHQLTLDVV SDIVSTSLEI EGSFIQKPQM
IWDGALRRLT LSTPQGPWAL QKSTAVKVNI DKQIADVQAH CWLQANSSVC LTEDISVGQS
GEAKLAVNDF DFEQIKQFLP PETKLQGSVN AQATAKWAPE MKPEVTVNVD MPKGQVEQAL
EQPITLGWES FSFKAALAKD KLDAEWLFDV RDNGDLSGQV SLVDVTSEQP EIDGKVSLST
FHLDFLAPLI GEYSLFKANM NTDLAISGDV MHPKVNGQFL IEQMKLQGEV TPIDINSGQV
AINFKGHQAD LDAGIMTPDG ELEVTGEADW QDLQNWHTKA RVFAKELQVD LPPMVKIKVE
PDMTIDVTPQ LAKVEGNINL PWGRVVVEEL PPSAVGVSSD TVILDQNLQP VSDIEPMPFD
VETDINIKIG DDFQLAAFGL KGGLKGNLNV TQKDKGPFIV GEVNIVDGSY RSFGQDLVIE
EGKILMNGPA DQPYVSIKAI RNPDNTQDDV IAGVRVTGPA SDPNVEIFSE PAMPQANALS
YLLRGQDIDG EAGGNAMTTT LIGLSLAKSG RVVGEIGEAF GVQDLQLDTA GSGDDSQVTV
SGYILPGLQV KYGVGIFNSL GEFTVRYRLM QDLYLEAVSG VDSAVDLLYQ FEFD
|
|---|
| |