Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001686 |
Symbol | |
ID | 8555315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 84233 |
End bp | 85225 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646404679 |
Product | thiamin ABC transporter substrate-binding component |
Protein accession | YP_003284314 |
Protein GI | 262392460 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily [TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACCA CTTCAAGTCT GATTGCCTTA GCTGCAATTA CTTCAACTTC AGCGTTTGCT GCTGAAAACC CATTAACTAT TTATACCTAC GATTCTTTTG CCGCAGATTG GGGACCAGGT CCTAAAATCG AGCAAGCTTT TGAAGCAAAA TGTGGCTGTG ACGTTAACTT CGTGGCGTTG GACGATGGTG TGTCGATCCT GAATCGTCTT CGTCTTGAAG GCGGTAATAG CAAAGCCGAC ATCGTGTTAG GTTTGGATAA CAATCTGATG GCAGAAGCGA AGAAAACCGG TCTGCTTACC GAGCACAATG TGGATACGGC TAACACAGTG TTACCAAATG GTTGGAGCGA CACGACGTTT GTACCGTACG ATTACGGCTA CTTCGCGTTT GTGTACAACA CAGAGAAACT GGCTAATCCG CCGAAAAGCA TGAAAGAGCT GGTGGAAACG CGCGACGATT TGAAAGTGAT TTATCAAGAT CCGCGTACGT CAACGCCGGG CCAAGGCTTG ATGCTGTGGA TGAAATCCAT CTATGGCGAC GATGTGACGC AAGCGTGGCA GAAGCTAGCG AGCAAAACCG TAACGGTCAC GAAAGGTTGG TCAGAAGCGT ATTCCATGTT CCTTAACGGC GAGTCGGACT TAGTGCTTTC TTACACTACG TCACCTGCGT ACCACTTAAT TGCGGAAAAC GATTCAAAGT TTGCGACGGC GAATTTTGCT GAAGGTCACT ACATGCAAGT TGAAGTCGCC GCTAAAGTGA AAGGGGCAAA AAATTCAGAA CTTGCTGATC AATTTATGAA TTTCATTTTA AGTGATGAGT TCCAGTCAGC GATGCCAACG GGTAACTGGA TGTACCCTGT TACTGACGTT GAGTTACCTA AAGGTTTTGA AACCTTGAGC GTTCCAAACA AGTCGTTGAG CTTTAGTGCT GATGAAGTGG CAAAAATGCG TAAGTCTTGG ATTCGTGAAT GGCAAAGCGC ACTGACGTTT TAG
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Protein sequence | MKTTSSLIAL AAITSTSAFA AENPLTIYTY DSFAADWGPG PKIEQAFEAK CGCDVNFVAL DDGVSILNRL RLEGGNSKAD IVLGLDNNLM AEAKKTGLLT EHNVDTANTV LPNGWSDTTF VPYDYGYFAF VYNTEKLANP PKSMKELVET RDDLKVIYQD PRTSTPGQGL MLWMKSIYGD DVTQAWQKLA SKTVTVTKGW SEAYSMFLNG ESDLVLSYTT SPAYHLIAEN DSKFATANFA EGHYMQVEVA AKVKGAKNSE LADQFMNFIL SDEFQSAMPT GNWMYPVTDV ELPKGFETLS VPNKSLSFSA DEVAKMRKSW IREWQSALTF
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