| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001662 |
|---|
| Symbol | |
|---|
| ID | 8555291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 60629 |
|---|
| End bp | 62974 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646404655 |
|---|
| Product | Imp required for envelope biogenesis/organic solvent tolerance protein precursor |
|---|
| Protein accession | YP_003284290 |
|---|
| Protein GI | 262392436 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1452] Organic solvent tolerance protein OstA |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATT TCTCCCGCAC ATGTTTAGCG GCCTCTATCA GCACCGCCTT GTTTGTACCC
ACCACTCAAG CTGAAGCGAA TATCCATGAT AGTGTGCAGG AAATGCCCGC CACAGATCAA
TGTTTGGTCG ATACCAGTGG CGAGGAGGAC GCTCTTAATA CCCCAGTAGT GGTAGAAGCT
GACACCCTGC AAGCCATCAA TGGTGACAAA GCTCAGTACT CAGGTAATGT ACAAGTCACC
CAAGGCCAGA AGAAAATCAC CGCAGATAGC GTAACGCTGC ACCAACAAGA TAACGTCGTG
GTTGCCGAAG GCAACGTGAC TTTCAATGAC GGCCAAGTCA AAGCTCGATC TGATCGTGTT
ACTAATGACA TCAACCAAGA CACGTTTTCA CTGGAGAACA CCGATTATCA GTTCCTTTGC
CAACAAGGTC GAGGCACAGC AGCATACATC GCGCGTACAG GTCAGTCGGT TTATGAACTC
GAAGATGGTT CTATTACATC ATGTCCTCAA GGCGACAATT CATGGCGTTT AGTGGCATCA
GGTATTGACG TTGACCAAGA TGAAGAGACG GCGACGCTGC ACCATCCTCG ATTTGAAGTG
TTAGACGTTC CTGTTTTCTA TGTGCCGTAT CTAACCATGC CAATTGGAGA TACGCGTAAA
ACGGGTTTCC TCTTCCCTTC TTTATCTTAT GGTTCTAGCG ATGGTATGGA AGTCGAGGTG
CCATTCTATT GGAACATCGC ACCTCAATAT GACATGACGC TCACCACGCT CTACATGCAG
CAGCGCGGAA CAAAACTCGA TACTGATTTC CGCTACCTAA CGGATGGTTG GGGGAATGGT
GAAATCAAAG GCGAATACCT CAATAGCGAT CGCAAATATC AAGACGAGTC TCGTTGGGGC
TACCAAGTTA AACACGACGG TATTATCAAT AAACAGTGGA TAGTCAAAGT CGATTACTCA
AAAGTGAGTG ATATTGATTA CTTCCTCGAT CTCGACTCCG ATATTGGTAA CCGTGAAGAT
GGTCAACTGG TTCAAGAAGG ACAAGTACAA TATCGTTCTG ATTTCTGGGA TGCCTCGTTA
ACCGTTCGCG ACTTCCAAAT CTTATTGAAA GAAGAGAACC GCCCTTATCG CCTGCTTCCT
CAGTTAGACT TGAACTACTA CACGCCATTG TGGGGAGATT ACCTCAACTT TGACGTGAAG
AGCCAAGTGA GCCGCTTCGA TACGAGCGAT GCTGCGCGAC CAAATGCGAC CCGTGTTCAT
ATTGAACCAG GGCTTACATT GCCGCTTTCA AATTCATGGG CAACGTGGAC AACGGAAGCT
CGCGTGCTTT CCACGTACTA CTCTCAAGAC TTAACGGGTC TGACAGATGT AAATTTGCAA
AACCAGTTAG ATGACGAAGT GTCTCGTGTT ATCCCCGAGT TCCGTACGCA TGCGCAACTT
TACTTAGAGC GAGACACGAG TTGGATCAAG GGCTACACAC AAACACTGGA ACCTCAGCTG
CAGTACTTGT ACGTACCTGA AGAAGATCAA ACCAATATCT ACAACTACGA TACCACCTTG
CTACAAACCG ACTACTACGG GCTATTCCGC AGTCGTAAGT ACAGTGGCAT TGATAAAATC
GCCTCTGCGA ACCAGTTAAG CTACGGTGCG AGTACTCGCT TCTTTGATGA TGACTATAAA
GAGCGTCTTA ACGTTTCATT TGGTCAGATT TACTACTTCG ATAAAAAGAC CAAACTGAGC
AACAGCCCAA ATCTTCCGGA TGAGACCACC AACTATTCAT CATGGGCGAT TGAAGCTGAT
TTCAACTACA ACGATTACTT GTTCTATCAC GGTGGAATTC AATACGATAT CGATTTGAGC
TCCATGCAGT TGGCGAACAG TACCTTAGAG TACCAATTTA ACGGTGGCTT TATTCAGGGT
AACTATCGTT ACGTCACGCG TGAATACATC GAAGATACGA TCATTCTCGA AAACCTAGAC
ACAATTACTC GTAAAGGCAT TTCACAAGCA GGTATTGTTG CGGCCTACGA GTTCAACCCG
AACTGGTCTG CAAGTGGTCA ATACTACTAC GACCTAAATG AAAATGCGGA CCTAGAATGG
CTAGCGAGCC TGCGTTACCA GTCTGACTGT TGGTACATTG GTGTGACTTA CGCCAACCAA
TTGCTTGGTT GGGAAAACCA AACTATCGGC AGCACTGGCG CATCACCTGA ATACGAAAAT
AACTTTAGCG TTAACTTCGG TATTCAAGGC TTTGCGACCA ATCAGCGTGA AGACACTGCA
GTCAAAGAAC TGGATGGTTC TGACAACGCG ATTAAGTACG GCCGCCCATT CTATCTGAAC
AATTAA
|
|---|
| Protein sequence | MQHFSRTCLA ASISTALFVP TTQAEANIHD SVQEMPATDQ CLVDTSGEED ALNTPVVVEA
DTLQAINGDK AQYSGNVQVT QGQKKITADS VTLHQQDNVV VAEGNVTFND GQVKARSDRV
TNDINQDTFS LENTDYQFLC QQGRGTAAYI ARTGQSVYEL EDGSITSCPQ GDNSWRLVAS
GIDVDQDEET ATLHHPRFEV LDVPVFYVPY LTMPIGDTRK TGFLFPSLSY GSSDGMEVEV
PFYWNIAPQY DMTLTTLYMQ QRGTKLDTDF RYLTDGWGNG EIKGEYLNSD RKYQDESRWG
YQVKHDGIIN KQWIVKVDYS KVSDIDYFLD LDSDIGNRED GQLVQEGQVQ YRSDFWDASL
TVRDFQILLK EENRPYRLLP QLDLNYYTPL WGDYLNFDVK SQVSRFDTSD AARPNATRVH
IEPGLTLPLS NSWATWTTEA RVLSTYYSQD LTGLTDVNLQ NQLDDEVSRV IPEFRTHAQL
YLERDTSWIK GYTQTLEPQL QYLYVPEEDQ TNIYNYDTTL LQTDYYGLFR SRKYSGIDKI
ASANQLSYGA STRFFDDDYK ERLNVSFGQI YYFDKKTKLS NSPNLPDETT NYSSWAIEAD
FNYNDYLFYH GGIQYDIDLS SMQLANSTLE YQFNGGFIQG NYRYVTREYI EDTIILENLD
TITRKGISQA GIVAAYEFNP NWSASGQYYY DLNENADLEW LASLRYQSDC WYIGVTYANQ
LLGWENQTIG STGASPEYEN NFSVNFGIQG FATNQREDTA VKELDGSDNA IKYGRPFYLN
N
|
|---|
| |