| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001657 |
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| Symbol | |
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| ID | 8555286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 55066 |
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| End bp | 56157 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646404650 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003284285 |
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| Protein GI | 262392431 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA AATCATACAA AATTGCTGTC CTACCCGGTG ACGGCATCGG CCCGGAAGTA
ATGGCGCAAG CACACAAGGT ATTGGATGCT ATCGAAAAGA AGCACGGTAT TGCGTTTGAG
CGTGACGAAC ATGATGTAGG CGGCATCGCG ATCGATAATC ATGGCAGCCC ACTTCCAGAA
AGCACCGTAA AAGCGTGTGA AGAGTCTGAT GCAGTACTAT TTGGCTCGGT TGGCGGCCCG
AAGTGGGAGC ACTTGCCACC CAACGACCAA CCTGAACGCG GTGCCTTACT ACCACTACGC
AAACACTTCC AACTGTTTTG TAACCTACGC CCAGCGCAAA TCCACGCAGG CCTGGAAGCT
TTCTCACCAC TTCGTGCTGA CATCTCAGGC CGTGGTTTTG ACATCGTGGT AGTCCGTGAA
CTGACTGGTG GTATCTATTT CGGTCAACCA AAAGGCCGTG AAGGCGAAGG CGCAACAGAA
AAAGCGTTTG ATACTGAGGT GTACCACCGC TTTGAGATCG AACGTATTGC AAAAATCGCT
TTTGAGTCTG CTCGTCTACG TCGCAAGAAA GTGTGCTCTA TCGACAAAGC GAACGTTCTA
CAAAGCTCTA TTCTATGGCG TGAAGTAGTC GAAGAAATCG CAAAAGATTA CCCAGATGTC
GAGCTATCAC ACATGTACAT CGACAACGCA ACCATGCAGC TTATCAAAGA CCCAGCTCAG
TTCGACGTGA TGCTGTGTTC AAACATCTTC GGCGACATCA TTTCCGATGA GTGCGCAATG
ATCACTGGCT CTATGGGTAT GCTGCCTTCA GCGAGCCTAA ACGAAAGCAA ATTCGGTCTG
TACGAGCCAG CAGGCGGCAG TGCACCCGAT ATCGCAGGTA AGAACATCGC TAACCCAGTG
GCGCAAATCC TATCTGCGGC ACTGATGTTA CGTTATAGCC TTGGCGAAGA AGCCGCAGCA
CAAGACATCG AAGCAGCGGT GTCGAAAGCA CTTTCAGCTG GCGAGCTAAC AGGCGACCTT
GCAGGCAACA ACCCGGCACT TACAACATCA GAGATGGGCG ATAAGATCGC TGAGTACATC
CTAAACTCGT AA
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| Protein sequence | MTDKSYKIAV LPGDGIGPEV MAQAHKVLDA IEKKHGIAFE RDEHDVGGIA IDNHGSPLPE
STVKACEESD AVLFGSVGGP KWEHLPPNDQ PERGALLPLR KHFQLFCNLR PAQIHAGLEA
FSPLRADISG RGFDIVVVRE LTGGIYFGQP KGREGEGATE KAFDTEVYHR FEIERIAKIA
FESARLRRKK VCSIDKANVL QSSILWREVV EEIAKDYPDV ELSHMYIDNA TMQLIKDPAQ
FDVMLCSNIF GDIISDECAM ITGSMGMLPS ASLNESKFGL YEPAGGSAPD IAGKNIANPV
AQILSAALML RYSLGEEAAA QDIEAAVSKA LSAGELTGDL AGNNPALTTS EMGDKIAEYI
LNS
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