Gene VEA_001650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001650 
Symbol 
ID8555279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp46758 
End bp48566 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content46% 
IMG OID646404643 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_003284278 
Protein GI262392424 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGT TAGATTTTCA TATCGTTAAA CGTATTCGTG AACAAATTGC GAACGGTGGT 
ACACGCGTTG CACTCAAGCA TAAAGTGGAT GAGGAATGGC AAGGTATTAC GTGGACGCAA
TTTGGTCAGC AAGTTGATGC TTTATCACTT GCACTTTTGG CTCAGGGATT AGGAGTCCAA
GATAAAATCG GCATTTTCTC GAACAACATG CCGCAATGGA CGATTGCTGA TATTGCAGCG
CTACAACTAC GCGGCGTAAC AGTACCTATT TACCCAACCA ATACCGCCGC TCAGTCGGCG
TACATCATTG ACAACGCAGA CGTTAAAGTG CTGTTTGTTG GTGAGCAGCC ACAATTTGAC
GCAGCAGTGA GCATTTTCGA CCAGTGCGAG CAGTTAGAGC TCATTGTTGC CATGTCTGAT
GATATCGAAC TTGGCGAGCA TGATTTCGTT ATCTCTTGGC AAGCATTTGT CGCCAAAGGC
GATACCACAT ACCAAGTTGA ATTGGACGCA CGTTTAGAGC AAGCAAAGGA AGATGATCTA
CTCACGTTGA TCTACACCTC GGGCACAACA GGACAACCAA AGGGTGTCAT GTTGGACTAC
GCAAACATTG CGGCGCAATT GGAAGGGCAC GATCAACGTT TGAGCCTTTC TCAAAGTGAT
GTGTCACTGT GTTTCCTTCC GTTGTCACAC GTATTTGAAC GCGCTTGGAC CTTTTATGTG
TTGTACAAAG GAGCGACCAA CTGCTATTTG CAAGACACCA TGCAGGTACG TGATGCACTG
AGCCAAGTAC GACCTACCGT GATGTGTGCC GTACCGCGTT TCTATGAGAA GATCTTCTCT
GCGATTCATG AGAAAGTGTC TCGCGCACCG ATTCACCGTA AGATTATGTT TACTTGGGCT
GTGAACATGG GCGCAAAAAT GGCCGCTTGT CATCAAGAAA AACGTCAGCC ATCGCTCATG
CTGCGCAAGT CATATGCATT GGCGGATAAA TTGGTTCTGA GCAAGCTGCG TGCGTTACTT
GGTGGACAAA TCAACTTTAT GCCGTGTGGC GGTGCGAAGT TAGATGAAAC CATAGGCCGA
TTCTTCCACG CGATTGGTAT CAATGTGAAG TTAGGTTACG GCATGACTGA AACCACGGCG
ACAGTATCGT GTTGGGATGA TAAGTGCTTT AACCCAGACT CTATTGGTAT GTCGATGCCT
GGCGCGCAAG TGAAGATCGG TGAGAACAAC GAGATTCTGG TGCGTGGTCC AATGGTGATG
CGTGGCTATT ACAAAATGCC AGAAGAGACC GAAAAGACCT TTGATGAGCA CGGTTTCCTA
AAAACTGGCG ATGCGGGTTA CATTGATGAA AATGGCAATT TGTTCATTAC TGATCGTATC
AAAGAATTGA TGAAAACCTC TGGCGGTAAA TACATCGCTC CGCAAATGAT TGAAGGTGCG
ATTGGTAAAG ACCACTTCAT CGAGCAAATC GCGGTTATCG CGGACACGCG TAAGTTTGTC
TCGGCGCTGA TTGTGCCGTG TTTTGATTCT CTTGAAGAGT ATGCGAAAGA GCTGAATATC
AAGTATCACG ATCGCGTTGA ATTGATTAAG CATCACCAAG TGGTCGAAAT GCTTGAGAAG
CGTGTTAACG ATCTCCAAAA AGAGTTGGCA AAGTTTGAAC AGGTGAAGAA GTTTAAACTG
TTACCAAGAG CTTTCTCTAT GGATGATGGT GAGTTAACGC CAACTCAAAA ACTGCGTCGT
AAAGTCATCA ATGACAAATA CCAAGATGAA ATTGAAGAAA TGTATAAGGA AAAGTCAGAG
AAAAAGTAA
 
Protein sequence
MAKLDFHIVK RIREQIANGG TRVALKHKVD EEWQGITWTQ FGQQVDALSL ALLAQGLGVQ 
DKIGIFSNNM PQWTIADIAA LQLRGVTVPI YPTNTAAQSA YIIDNADVKV LFVGEQPQFD
AAVSIFDQCE QLELIVAMSD DIELGEHDFV ISWQAFVAKG DTTYQVELDA RLEQAKEDDL
LTLIYTSGTT GQPKGVMLDY ANIAAQLEGH DQRLSLSQSD VSLCFLPLSH VFERAWTFYV
LYKGATNCYL QDTMQVRDAL SQVRPTVMCA VPRFYEKIFS AIHEKVSRAP IHRKIMFTWA
VNMGAKMAAC HQEKRQPSLM LRKSYALADK LVLSKLRALL GGQINFMPCG GAKLDETIGR
FFHAIGINVK LGYGMTETTA TVSCWDDKCF NPDSIGMSMP GAQVKIGENN EILVRGPMVM
RGYYKMPEET EKTFDEHGFL KTGDAGYIDE NGNLFITDRI KELMKTSGGK YIAPQMIEGA
IGKDHFIEQI AVIADTRKFV SALIVPCFDS LEEYAKELNI KYHDRVELIK HHQVVEMLEK
RVNDLQKELA KFEQVKKFKL LPRAFSMDDG ELTPTQKLRR KVINDKYQDE IEEMYKEKSE
KK