| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001641 |
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| Symbol | |
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| ID | 8555270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 35258 |
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| End bp | 35950 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646404634 |
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| Product | putative two component response regulator transcription regulator protein |
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| Protein accession | YP_003284269 |
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| Protein GI | 262392415 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.170142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAATAT TGATCGTCGA AGATGAGCAC AAAGCCGGAG AATATCTGCA AAAAGGTTTG
ATTGAATCTG GGTATGTGGT GGATTTAGTA CATGATGGGG TCGATGGGCT GTATCACGCT
ACCAGTGAAG AATATGACTT AATCCTCCTC GACATTATGT TGCCTAAACT CGATGGTTGG
CAGGTGCTTA ATACATTGCG CAGTAGTGGG ATTCACACCC CAGTGATCAT GCTGACAGCG
AAGGAGCAAG TGGAAGATCG CGTGCGCGGT TTTGAGCTGG GTGCCAATGA CTATGTCGTA
AAACCTTACG CGTTTGCGGA GCTACTGGCG CGTATTCAAA ACGTATTTCG TCATCATATT
TCCGCGCAAG TGGTCGCATC GCCGCAAACA TTACGTGTGG CAGATTTAGA ACTTGATATG
ATCAAACGCG TTGCCACGCG CGCGGGGCAG TCGATGTCGC TTACCGCCAA AGAATATGCC
CTGCTTGAGT TGTTGATGCG CAAAACTGGC CAAGTGCTTT CACGTACCAC TATTGCGTCG
TTAGTGTGGG ATATGAACTT TGACAGCGAT ACCAATGTGA TTGATGTGGC GGTCAAACGT
CTGCGTAGCA AAGTGGACAA ACCGTTCGAT AAACCACTGA TTCACACTGT CAGAGGGATG
GGCTACAAAC TCGAAGAGAG TTGTGATGCC TAA
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| Protein sequence | MKILIVEDEH KAGEYLQKGL IESGYVVDLV HDGVDGLYHA TSEEYDLILL DIMLPKLDGW
QVLNTLRSSG IHTPVIMLTA KEQVEDRVRG FELGANDYVV KPYAFAELLA RIQNVFRHHI
SAQVVASPQT LRVADLELDM IKRVATRAGQ SMSLTAKEYA LLELLMRKTG QVLSRTTIAS
LVWDMNFDSD TNVIDVAVKR LRSKVDKPFD KPLIHTVRGM GYKLEESCDA
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