| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001635 |
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| Symbol | |
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| ID | 8555264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 26450 |
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| End bp | 28198 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646404628 |
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| Product | glycerol metabolism operon regulatory protein |
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| Protein accession | YP_003284263 |
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| Protein GI | 262392409 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCA ACGAGCACCT CATCGAATGC GCCACTACCG TACTTGAAGA CACTTACGAC
ATGCTAGGAG ACGAAGACCT GCTATTGATG GTGACTGATG GCAACGGCTG TATTCTCTCC
ACCGTCGGGC ACGACTCTAT GCGACAAGAG ATGCAAGCAC TCGGTATTAA ACAAGGCTGC
TTTCTGTCTG AAGGGAAAAT TGGCACAAAT GCAGTCAATC TCTGTATCAA CACTCACATC
CCATGTGAAG TTTTTGCTGC AGAACATTTC AATCGCCACT TACACTCTTA TGCCTCTGTA
GCGGCGCCTG TTTTCGACCA ATTTGGCAAA TTACGCGGTA CAACATGCCT TTTCAAAAAA
GCGGAAAGCT ATAAGAAAGA AGACTTAGTC ATCATCGCGT CGAGCGCGAA AGAAGTCAGT
TTGCAAATCC ATATTCAGTC GGAACAAGAA AATATGAACC GCCTCACTTG TGCGCACAAC
GCAACGTTAG AGTGCATGGA TGACGGCCTT CTGGCCTGGG ATGAAGAAAG CCGTATCACC
ATGGTAAATC ATCAATCAGA GCGCTTGTTA AACATTGAAG CCAGTCAGGT CTTGGATAAA
GAAGTCTTTT CTGTTTTACG CTTCCCGCCA AATGTCCTCA ATAGTATTGA GTCGGGTGCA
AGCATCAACC GAAAACTCAC AACGGTAGAG GTTCGTGGCG AGTTTGTTGA AGCGATCATT
ACCTTGCGTC CACTCAACGA CGGAACGCAC TTATTGTTTT TGCACCCTAT CGATAAAATT
CGCGAACTTG CTCAACAACA AATAGGTGGC AGTGCGCGCT ATACGTTCAG TACTTTGCCT
GTTATTTCAC GAAAAATGAA GCATGTCATT ACCGTGGCAA AACGGGCCAT AAAGTCCAAA
TCACCGATTC TAATTACAGG TGAAGAAGGT GTAGGAAAAG CCACTCTCGC CATGGCGATT
CATAACGAAA GCACCTACAA AGAAGGGCCG TTCATTACGC TCAACTGCCG CTCCATCAAT
ACAGAGCAAC TGGTCAAAGA AACCCTGGGA TACGACGAGG GACAAGGCAT GCCCTCTAAG
TTTGAACTCG CCCATGGCGG TACGCTCTTT TTGGAAAAGG TGGAATATCT GTCGCCCGAT
TTACAAGCCG TGCTACTTAA GTTGTTAAAA ACTGGGCTCG TCAGCCGCAG CGACAGTTTG
CGATTAATCC CCGTAGACTT TCAACTTATT ACGAGCACCG CTTCAGAGAT CAGCGAGTAT
GTCACTCAGC GCTCATTTGG TCGGCAACTT TATTATGAAA TCTCCTCGAA CGAGCTGCAT
ATTCCACCAC TACGAAAGCG TAAAGAAGAC ATTGAATTTC TCGTCCAGCA GCTTATCAGC
CATTATGAAC GCCGCCACAA TGTGACTATC TCGATAGAGC CAGTCGCACT GGAAGCGTTG
ATGAATTTTC GTTGGTCAGG CAATAACTCC GAATTAAGAA ACCGAACTGA GCGAATTTTG
CTGAACCGCA GTTCCAACTT AATCAAGCTG AACGATATTC CTGAAGACAT TAAACTGAAT
TCTCGCCATA CCGCAGAAAA TACGCCAGTA ATCACGTTAG AAGAAGCCGA GAGAAGAGCT
ATCGTTCAGG CTTGGAATCA GTGTGATGGC AAAATGCATG ATATGGCGAA AGCATTGCAA
ATTGGCCGCA CGACCTTATG GAGAAAAATT AATAAGTTTG GGCTGCAGGA GCAAATGAAG
CTGTATTAA
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| Protein sequence | MKRNEHLIEC ATTVLEDTYD MLGDEDLLLM VTDGNGCILS TVGHDSMRQE MQALGIKQGC
FLSEGKIGTN AVNLCINTHI PCEVFAAEHF NRHLHSYASV AAPVFDQFGK LRGTTCLFKK
AESYKKEDLV IIASSAKEVS LQIHIQSEQE NMNRLTCAHN ATLECMDDGL LAWDEESRIT
MVNHQSERLL NIEASQVLDK EVFSVLRFPP NVLNSIESGA SINRKLTTVE VRGEFVEAII
TLRPLNDGTH LLFLHPIDKI RELAQQQIGG SARYTFSTLP VISRKMKHVI TVAKRAIKSK
SPILITGEEG VGKATLAMAI HNESTYKEGP FITLNCRSIN TEQLVKETLG YDEGQGMPSK
FELAHGGTLF LEKVEYLSPD LQAVLLKLLK TGLVSRSDSL RLIPVDFQLI TSTASEISEY
VTQRSFGRQL YYEISSNELH IPPLRKRKED IEFLVQQLIS HYERRHNVTI SIEPVALEAL
MNFRWSGNNS ELRNRTERIL LNRSSNLIKL NDIPEDIKLN SRHTAENTPV ITLEEAERRA
IVQAWNQCDG KMHDMAKALQ IGRTTLWRKI NKFGLQEQMK LY
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