Gene VEA_001628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001628 
Symbol 
ID8555257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp18684 
End bp19403 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content46% 
IMG OID646404621 
Productputative periplasmic protein 
Protein accessionYP_003284256 
Protein GI262392402 
COG category[S] Function unknown 
COG ID[COG2859] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGA TTTCCAATAG AGCGTCAATA TGGCTCGGGC TGTGTCTGAT AATTGGTTTA 
GGAGTATTGG GCTTTTTTAT TCAGCAAACA GCAGTCAAAT ACAAAGCCTA TGAGCGAGTG
GTAACGGTGA AGGGATTGTC TGAACGAGAG TACTCTGCAG ATACAGTGAT CTGGCCAATT
CAGTTCACCT TAGCGAGTAA TGATATGGGG GCTATGTTTG ATGACATCGA TCAGCAAACG
CGTTTGATTC TGGATTTCTT AAGTGCCAAA GGGCTCCCTG AAACCAGCGT TTCCCTTTCT
TCTCCTGCTG TCATTGACCG AAAAGCACAG CAATACGGGA GTGAGCAAGA TATCGAGTTT
CGTTATTTAG CCTCGCGGAC CGTTACGGTT TATAGTCAAA GTGTCGATGT GGTTCGAGCG
GCAATTAATG AGATTGGTGA GCTAGGAAAA CAAGGCGTAC TGCTGAATCA GGACCCGTAC
GCGAACCGAA TTGAGTACAG CTTTACTAAG CTGAATGATG TAAAGCCAGA CATGATCGAA
GAGGCGACGA AAAACGCCCG CGAAGTGGCG CAAAAGTTTG CGAAAGACTC ACAGAGTTCA
TTGGGTAAGA TCAAACGTGC CACGCAAGGG CAGTTCTCGA TTTATGACCG AGATAGCAAC
ACGCCTTACA TTAAGAAAGT ACGAGTGGTC TCAACCGTTC AGTATTACTT ATCGGATTAA
 
Protein sequence
MEKISNRASI WLGLCLIIGL GVLGFFIQQT AVKYKAYERV VTVKGLSERE YSADTVIWPI 
QFTLASNDMG AMFDDIDQQT RLILDFLSAK GLPETSVSLS SPAVIDRKAQ QYGSEQDIEF
RYLASRTVTV YSQSVDVVRA AINEIGELGK QGVLLNQDPY ANRIEYSFTK LNDVKPDMIE
EATKNAREVA QKFAKDSQSS LGKIKRATQG QFSIYDRDSN TPYIKKVRVV STVQYYLSD