Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001628 |
Symbol | |
ID | 8555257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 18684 |
End bp | 19403 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646404621 |
Product | putative periplasmic protein |
Protein accession | YP_003284256 |
Protein GI | 262392402 |
COG category | [S] Function unknown |
COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAGA TTTCCAATAG AGCGTCAATA TGGCTCGGGC TGTGTCTGAT AATTGGTTTA GGAGTATTGG GCTTTTTTAT TCAGCAAACA GCAGTCAAAT ACAAAGCCTA TGAGCGAGTG GTAACGGTGA AGGGATTGTC TGAACGAGAG TACTCTGCAG ATACAGTGAT CTGGCCAATT CAGTTCACCT TAGCGAGTAA TGATATGGGG GCTATGTTTG ATGACATCGA TCAGCAAACG CGTTTGATTC TGGATTTCTT AAGTGCCAAA GGGCTCCCTG AAACCAGCGT TTCCCTTTCT TCTCCTGCTG TCATTGACCG AAAAGCACAG CAATACGGGA GTGAGCAAGA TATCGAGTTT CGTTATTTAG CCTCGCGGAC CGTTACGGTT TATAGTCAAA GTGTCGATGT GGTTCGAGCG GCAATTAATG AGATTGGTGA GCTAGGAAAA CAAGGCGTAC TGCTGAATCA GGACCCGTAC GCGAACCGAA TTGAGTACAG CTTTACTAAG CTGAATGATG TAAAGCCAGA CATGATCGAA GAGGCGACGA AAAACGCCCG CGAAGTGGCG CAAAAGTTTG CGAAAGACTC ACAGAGTTCA TTGGGTAAGA TCAAACGTGC CACGCAAGGG CAGTTCTCGA TTTATGACCG AGATAGCAAC ACGCCTTACA TTAAGAAAGT ACGAGTGGTC TCAACCGTTC AGTATTACTT ATCGGATTAA
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Protein sequence | MEKISNRASI WLGLCLIIGL GVLGFFIQQT AVKYKAYERV VTVKGLSERE YSADTVIWPI QFTLASNDMG AMFDDIDQQT RLILDFLSAK GLPETSVSLS SPAVIDRKAQ QYGSEQDIEF RYLASRTVTV YSQSVDVVRA AINEIGELGK QGVLLNQDPY ANRIEYSFTK LNDVKPDMIE EATKNAREVA QKFAKDSQSS LGKIKRATQG QFSIYDRDSN TPYIKKVRVV STVQYYLSD
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