| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001627 |
|---|
| Symbol | |
|---|
| ID | 8555256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 17581 |
|---|
| End bp | 18630 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646404620 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_003284255 |
|---|
| Protein GI | 262392401 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ATACCTACCC TTTACTTGCC ATCTCAGGCG GTCTTTTATT GACGGGCTGT
GGTAGCGACG ACTCTTCATC CGATACAGAA GCAGCCACTT TTTCTCTCAG CGTTTCCGAT
GCGCCTGTCG ACGATGCCAA CAAAGTCGTC TTAGCGTTTA AAGATGTTGT CCTTGTACCA
TTTGACCCAG AAACTGGCGA ACAGACTGGA GAACATATTC TGTTAGATGT TAGTGACAAT
GGAGCACTAC ACCAAGTTGA TCTAATGGAA TATCAGGGAA GTAACGCTAA AACGATCATT
AGCGAGCAAG ACATCGCTCC TGGTGATTAT GCTATGTGTG TGTACGCTCA AGACGGCAAA
CAATTAAACG ATACAACGCT GTCATACGTA GAGAAGACAG ACGGCAACAT CAAAGGCTTA
GTTGTGCCTA GCCGAGGCAG CTGTTTTGGT TTTAAACCAG ATACGAGCGA TCAAGGTCGC
TTGAAGTTTT CGCAAAAAGG TCAGTATGTA AAAGTTCATA CTGGTCATAA TAGCTATGTT
GTCGAGTTTG ATTTGCGTAA AGGTCTGGCA GATCCAACGG GCAAAGATTA CATGAACATG
AACTCTAATG CGGTAAGCTT AGTAAACGCA TCAGAATCAG GTCATATCGG TGGTGAAGTC
AGCGAAATTC AGTATCAAGC GTGTGAAGCA GACAGTGCAG CATCAAATGC AATAAATGAC
GTTCCTGCCG TTCACTCAGT CTATCTTTAC GCAGGTTCGA TGGATCGCTC AACCATGGGC
GATATGGGCG CGATGGAACC ACTCCAAGCG CCAGTTGCAG TAGCTAACGT GAATGAATCG
CAAGACGAAG AAGGTAATAC AACCTACAGC TACGAGTTTG GTTACATGGG CCCAGGCACC
TACAGTATTG GGTACACCTG TACCGCGTAT GTTGACACAC CAGATAACCA TGAAACATCA
GAAGATGGCT TCCTGATTTA TCAACATTAC ACACCTGTTG ATGTGGTCGA AGGTGAGCAT
ACAGAGCAAG ATATTAATCC TATCCTATAG
|
|---|
| Protein sequence | MKKYTYPLLA ISGGLLLTGC GSDDSSSDTE AATFSLSVSD APVDDANKVV LAFKDVVLVP
FDPETGEQTG EHILLDVSDN GALHQVDLME YQGSNAKTII SEQDIAPGDY AMCVYAQDGK
QLNDTTLSYV EKTDGNIKGL VVPSRGSCFG FKPDTSDQGR LKFSQKGQYV KVHTGHNSYV
VEFDLRKGLA DPTGKDYMNM NSNAVSLVNA SESGHIGGEV SEIQYQACEA DSAASNAIND
VPAVHSVYLY AGSMDRSTMG DMGAMEPLQA PVAVANVNES QDEEGNTTYS YEFGYMGPGT
YSIGYTCTAY VDTPDNHETS EDGFLIYQHY TPVDVVEGEH TEQDINPIL
|
|---|
| |