| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001625 |
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| Symbol | |
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| ID | 8555254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 16179 |
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| End bp | 16982 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646404618 |
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| Product | methionine ABC transporter substrate-binding protein |
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| Protein accession | YP_003284253 |
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| Protein GI | 262392399 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.653614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA TTCGTCACCT AAAGAAACTA GCTTTGGTTC TCACGGCAGT AGTTGGCTTA
AGCGCTTGTG GAGAAAAAGA TGACTCTGTC ATTAAAGTGG GAGCAACCGT AGGGCCTCAT
GCTCAAGTAG TTGAAGCAGT AGCGAAGGAA GCAGCGAAGC AAGGCTTGAA TGTAGAAGTC
ATCGAGTTTT CTGATTACGT GACACCCAAT GCCGCGCTTA GCGATGGTAG CATCGACATT
AACAGCTATC AGCACCAACC ATTTTTAGAC AACTTCAACA ATAGTCATGA CGCCCAATTA
GTGTCGATTG GTCAATCCAT TCTGATGCGC ATGGGACTTT ATTCTAACAA GTATCGCTCA
TTGCAAGAGC TTCCAAACAA TGCACGCATA GCAATTCCAA ACGATCCAAC TAATGGTGGT
CGTGGTCTAT TGCTACTCGC CGATGCAGGT TTAATTGAGC TTAAACAAGG TGTTGGCCAC
AAAGCAGCCT TAACTGATAT TACAAAAAAT GCAAAGTCGT TTGAATTTGT CGAGGTAGAT
GCCGCCCAGT TACCACGAAC ATTGGATGAT GTAGACGCGG CTGCGATCAC AATGAACTAC
GTAATGTCTT CTGGTTTAGA TCCGAAGAAA CAAAGTATCT ATCTTGAAGC AAAAGACGCA
CCGCTGGCCG TCATGGTCAT CGCTACTCGT GACGCAGACA AAAATAATGA AGCGTATAAA
AAGTTCGTTT CTATTTACCA ATCTCAAGCA ATTCGTGATT ATCTCGATCG TACGTTCAAA
GGCACAATAG AAGCAGCTTT TTAA
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| Protein sequence | MKSIRHLKKL ALVLTAVVGL SACGEKDDSV IKVGATVGPH AQVVEAVAKE AAKQGLNVEV
IEFSDYVTPN AALSDGSIDI NSYQHQPFLD NFNNSHDAQL VSIGQSILMR MGLYSNKYRS
LQELPNNARI AIPNDPTNGG RGLLLLADAG LIELKQGVGH KAALTDITKN AKSFEFVEVD
AAQLPRTLDD VDAAAITMNY VMSSGLDPKK QSIYLEAKDA PLAVMVIATR DADKNNEAYK
KFVSIYQSQA IRDYLDRTFK GTIEAAF
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