| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001623 |
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| Symbol | |
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| ID | 8555251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 11936 |
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| End bp | 13702 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646404615 |
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| Product | DNA primase |
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| Protein accession | YP_003284251 |
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| Protein GI | 262392397 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00199304 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGAC ACATCCCTCG CAGTTTTATC GATGACCTTC TAGCTCGACT TGATATTGTC
GATATCATCG ACGCACGTGT GAAACTTAAG AAAAAAGGCA AAAACTACGG CGCATGCTGC
CCGTTCCACA ACGAAAAGAC GCCGTCATTC AGCGTCAGTC AAGAAAAACA GTTCTACCAT
TGTTTTGGTT GTGGTGCGCA CGGAAATGCC ATCGACTTCT TGATGGAATT CGACCGGCTA
GAATTCGTCG AAGCCATTGA AGAACTCGCT TCATACTTGG GCTTAGATGT TCCTCGCGAA
CAACGTAGCG GCGGTAATGG TTCGTTCCAG TCAGGCCCAC AAGCAAGCAG CAGTGAAAAA
CGTAATCTAT ACGACTTAAT GGGCAGCATT GCTCAATTTT ATCGTAACCA ACTCAAGCAG
CCAGCAAGTA AAGTGGCGAT TGAGTATCTA AAAGATCGCG GCCTGTCTGG TGAAATCGTC
CAGAAATTTG GCATCGGCTA TGTGGCTGAT GAATGGGATT TAGTTCGTAA GAACTTTGGC
CAGAATAAAG AAAACCAAGA CATGCTCGTC ACAGGCGGCA TGTTGATTGA AAACGATAAA
GGCAACCGCT ACGACCGATT CCGTGGTCGA GTGATGTTTC CTATTCGAGA CAGACGCGGC
CGAGTGATAG GCTTTGGTGG TCGAGTATTA GGTGATGGGA CACCAAAATA TCTCAACTCA
CCCGAAACCC CGATATTTCA TAAAGGTAAA GAGTTGTATG GCCTTTATGA AGTACTACAA
GCGTATCGTG AGCCACCACA AATTTTAGTG GTTGAAGGCT ATATGGATGT TGTCGCGCTT
GCTCAATATG GCGTAGATTA TTCCGTTGCC TCATTGGGAA CCTCGACAAC GGGCGATCAC
TTGCAAGTGT TATTCAGGCA AACAAGCACC GTCGTATGTT GTTACGACGG TGACCGCGCA
GGCCGTGAAG CCGCGTGGCG TGCCATGGAA AATGCATTGC CTTACCTAAC TGATGGTCGC
CAGTTAAAAT TCATGTTTTT GCCGGATGGA GAAGATCCCG ACTCTTACAT CCGACAAAAC
GGAAAACAAG CATTTGAACA ACAAGTGTCT AATGCGATGC CCTTGTCTGA ATTCATGTTC
AGCTTATTGA CTCAGCAAGT CGATATGAGC ACGAAAGAAG GCATGGCAAA GCTGAGTACC
CTTGCTGTTC CTCTCATCGA CAAAGTCCCT GGCGGCACTT TAAGACTATA CTTGAGAGAA
CTGCTTGGCC GCCGTTTGGG TTTGGTTGAT GAACGCCAAC TACAGCAGCT AATTTCAAAA
CAAGGTAAAG AGGATAAAAG GCCTCAACCT CATAAAGAAA TCAAGCGAAC GCCGATGCGA
GAAGTGATCG CGTTACTGAT TCAAAACCCA CAATACGTAA GTATGGTGCC AGATCTAACT
AGCGTTAGAG ATTTGCCCAT TCCTGGTCTA AGTTTATTTG TTGATGTACT TGATAAATGC
CAAGCGCATC CCCATATCAA CACAGGCCAA TTATTAGAGC ATTGGCGAAA CAGCCAAAAT
GAGACCCTTC TGTCTCGTCT CGCGAGTTGG GACATTCCAC TCGATGAGGA CAACCAAGAA
GAAATATTTT TAGACTCACT GGATAAAATT ATTGCCCAGT GCGTAGAAAA ACAAATTGAA
AACCTGCAGG CCAAAGCAAG AAGTGTCGGT TTATCAGCCG AAGAGAAAAG GGAGCTGCTA
GCACTTATGC TAGATTTAAA AGCGTAA
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| Protein sequence | MAGHIPRSFI DDLLARLDIV DIIDARVKLK KKGKNYGACC PFHNEKTPSF SVSQEKQFYH
CFGCGAHGNA IDFLMEFDRL EFVEAIEELA SYLGLDVPRE QRSGGNGSFQ SGPQASSSEK
RNLYDLMGSI AQFYRNQLKQ PASKVAIEYL KDRGLSGEIV QKFGIGYVAD EWDLVRKNFG
QNKENQDMLV TGGMLIENDK GNRYDRFRGR VMFPIRDRRG RVIGFGGRVL GDGTPKYLNS
PETPIFHKGK ELYGLYEVLQ AYREPPQILV VEGYMDVVAL AQYGVDYSVA SLGTSTTGDH
LQVLFRQTST VVCCYDGDRA GREAAWRAME NALPYLTDGR QLKFMFLPDG EDPDSYIRQN
GKQAFEQQVS NAMPLSEFMF SLLTQQVDMS TKEGMAKLST LAVPLIDKVP GGTLRLYLRE
LLGRRLGLVD ERQLQQLISK QGKEDKRPQP HKEIKRTPMR EVIALLIQNP QYVSMVPDLT
SVRDLPIPGL SLFVDVLDKC QAHPHINTGQ LLEHWRNSQN ETLLSRLASW DIPLDEDNQE
EIFLDSLDKI IAQCVEKQIE NLQAKARSVG LSAEEKRELL ALMLDLKA
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