Gene VEA_001612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001612 
Symbol 
ID8555240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2422 
End bp3105 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content46% 
IMG OID646404604 
Productgeneral secretion pathway protein B 
Protein accessionYP_003284240 
Protein GI262392386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.33696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCA TGAAACATAT TGGTTTGTTC TTGTTGCCGA TCACCGTTGC TGCAATCGGA 
GTTGCTTGGT ATTTAGATCT CCTTACGCCT CATGCTGAAG CTAGTACTTC CGCCCCTAAG 
GTCAAGATGG AAGCGGAACA ACCGTTCAAA GCATTGGACT ATCCTGAAAC TACTCAGTTG 
GCGCAATTGC CAAGAGAGTG GCCAAGTGCA GAGCTGTCTC GTGATTTTGG TACGTTTGCA 
ACATCTGATG AATACGTGAG TAATACAGCA AACAAAGACG AGATAGAAAC ATCTGTACCA 
ACTCAAGGCT CTTCAGTAGT TGAAGAGGAC CTAGGTTTGT CTCTGGATGA TCTTGACTTG 
TCCTCATTAT CTCCTGATTT GGCGCGAAAG GTCGAAAATG CGTTATCCCG AGGTGATGCG 
CCTTCACCAC AAACGGTGCG CGTGAACGAT TTAGAGCGCA ATGCTCACCA ATGGCAAGGG 
CGTTTACCTG CGCTCAATTT GCAAACTCAC ATGTATGCCA GTGATGAAAA TCGCCGCTGG 
GTGAAAATTA ACAATGTTGA ATATCATCAA GGAGACGTTG TTGATGGGCA GGTCACATTA 
AGAGAAATAC AACCACAAGC GGTGATTGTC GAGTTCCAAG GTGAGCAAAT TCGTATACCA 
GCGTTGTATG AGTGGAAAGG GTAA
 
Protein sequence
MSAMKHIGLF LLPITVAAIG VAWYLDLLTP HAEASTSAPK VKMEAEQPFK ALDYPETTQL 
AQLPREWPSA ELSRDFGTFA TSDEYVSNTA NKDEIETSVP TQGSSVVEED LGLSLDDLDL 
SSLSPDLARK VENALSRGDA PSPQTVRVND LERNAHQWQG RLPALNLQTH MYASDENRRW 
VKINNVEYHQ GDVVDGQVTL REIQPQAVIV EFQGEQIRIP ALYEWKG