Gene Gbro_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbro_4938 
Symbol 
ID8542162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGordonia bronchialis DSM 43247 
KingdomBacteria 
Replicon accessionNC_013442 
Strand
Start bp71984 
End bp73993 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content66% 
IMG OID 
ProductType IV secretory pathway VirD4 protein-like protein 
Protein accessionYP_003275944 
Protein GI262118174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACTG CCGCCACCCG CCGCCGCGAA GCCGGACAAC ACCCACCCAC CGCCGCACCA 
CTGGTGGCGG TGGTGGCCGC GATCGCGGTG ACCGCCGTGT TCTACCTGAG TCTGCGGGTG
GGGCACTGGT GGACCCGATC GCCGGCAGCC ATTCCGGCCA ACCCCGTGCG CGCGCTGCTC
GAAGTCACCC AGGGCCGACT AGCCTGGCCC ACCGCTTCCA CCGTGCTCGT CGTGCTGCTC
GGTGGCATCG GCGTGCTGGC CGTCGCCGCC GTCACGGTCA GCCGCACCCG AGATGGCCGG
GGACGGGAAC GGGATTTCGA CCGAGCGGCA CCGTTGATGG CCACCGCACG TGAACTCTCG
GCCGTGACCG TCAAAGAGGC CCGCGCCTCG GCGACGCGGC TGCGCCGCGA CCTCGCCGGG
CAACGGCCGG GATTCCTCGA TTACGGGCTG CTGCTCGGCC GCCTGGCCGG ACCGTCCTCG
GTACCGATCT TCATGCTGTG GGAATGGGTC GGCCTGGTCA TCGGCGGACC CCGCTGCGGC
AAAACATCGG CGATGGTCAT TCCCATGGGC TGTCAGGCAC CCGGCCCGGC GGTGCTGACC
TCCAACAAGG CCGACATCTA CGACGCCATC CGGTACGTCC GCGACGCCGA CTTCGATCCG
CACGCAGCCA GCTACACACT CGGCAGACCA CGACAGCAGC GGTGGTTCAC CCGCTGGTGG
AACGGGATCA CCGTCACCGC CCACGATCCC GGAATACGTG GACACCTGGG CCGCTGGCAT
GTGCGGCGCG TGATCCGTGC GCGGCGCAAC GCCGTCCAGG GCCGCATCTG GGTATCCGAT
CTGCAACACA TCGCCAGCGC CGAAGGCCAG CAGTGGTGGT GGGACCCGTT CTGGGACATC
GACGACCTCG CCGATGCCCG CGAACTCGCC GCCATCTTCA AAGGCGCCTC GACCGAGTCC
TCGGCACGCG TAGATGCCTA TTTCGACGGT GGGGCACAAG AACTCCTCGC GCTCTACATT
CTCGCTGCCG CCTGCGGTGG CGGCGATCTC AAGCACGTCG ACGGATGGCT GACCGACCCC
AAGCTGCAAC TTCCCCGCAA CCTGCTGATC CAGCACGGGC ATGCCGACGC AGCCGCGAAA
ATCTATGCCG CCCAGGACCT CAACAAACGG CAACAAGACG GCCTCTACGA CATGGCCCGC
CGCTTCATCA ACATCATGAC CGTCCCGAAA TATGCGTGCA CCGTCCTGCC ACCGCGGCGG
GTGCAGTTCG CCGGTGACAA CACCGTCGGC AACGCCGACC TGCACCACAA CCTGCCAGCC
TTTGACCCGC AACAGTTCGC GCAGTCGACC GACACCCTGT TCGCGCTCTC CAAAGAAGGT
GCCGGTGCGG CCACCGCACT GACCACCGCG CTGGCCGATT CGGTGTTCAA AGCCGCCACC
GCGATCGCCG AACAGCACGG CGGGCGACTG CCCACCCCGA TGGTGGCGTT ACTCGACGAA
GCCGCCAACG TGTGCAAACT TCCCGAATTA CCCGACTGGT ACTCGCATTT CGGTAGCCGC
GGCATCGTCG TGGTCACGTT CCTGCAGTCC TTGGCCCAGG CGTCCAAGGT GTGGTCGGCC
GAGAAGCTGG ACATGCTCAA AGACGCATCC AACGTCTACT ACTTCGCCGG CAACTCCAAC
AGCACCCCCT ACCTCGAATC ACTGGTCCGC ATGATCGGCA CCCGCGATGT GCGCCGCGTG
ACCCGCAACC GTAATGGCAG CGGCGGTGTC GGGTCATCGT CGATCAGCGA GAGCTGGTCC
TCAGAACCCA TCCTCGATGT GGCCGAACTC GGCGCCATGC CCGACACCCG TGCGGTGGTC
AAGACCTCAG GCAACCGGGT GCTGCTGCTC AAGAAGAACT CCTACTGGAA AGGCCCGTTC
CGCCACGCCT GCCACGCCTC GGAAAGTGCC GCCAAAGCCC AACGAATCGC TGCCGGGCTA
CCCCTCGACG GACAAGGAGC TGCCGCATGA
 
Protein sequence
MVTAATRRRE AGQHPPTAAP LVAVVAAIAV TAVFYLSLRV GHWWTRSPAA IPANPVRALL 
EVTQGRLAWP TASTVLVVLL GGIGVLAVAA VTVSRTRDGR GRERDFDRAA PLMATARELS
AVTVKEARAS ATRLRRDLAG QRPGFLDYGL LLGRLAGPSS VPIFMLWEWV GLVIGGPRCG
KTSAMVIPMG CQAPGPAVLT SNKADIYDAI RYVRDADFDP HAASYTLGRP RQQRWFTRWW
NGITVTAHDP GIRGHLGRWH VRRVIRARRN AVQGRIWVSD LQHIASAEGQ QWWWDPFWDI
DDLADARELA AIFKGASTES SARVDAYFDG GAQELLALYI LAAACGGGDL KHVDGWLTDP
KLQLPRNLLI QHGHADAAAK IYAAQDLNKR QQDGLYDMAR RFINIMTVPK YACTVLPPRR
VQFAGDNTVG NADLHHNLPA FDPQQFAQST DTLFALSKEG AGAATALTTA LADSVFKAAT
AIAEQHGGRL PTPMVALLDE AANVCKLPEL PDWYSHFGSR GIVVVTFLQS LAQASKVWSA
EKLDMLKDAS NVYYFAGNSN STPYLESLVR MIGTRDVRRV TRNRNGSGGV GSSSISESWS
SEPILDVAEL GAMPDTRAVV KTSGNRVLLL KKNSYWKGPF RHACHASESA AKAQRIAAGL
PLDGQGAAA