Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_4938 |
Symbol | |
ID | 8542162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013442 |
Strand | - |
Start bp | 71984 |
End bp | 73993 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Type IV secretory pathway VirD4 protein-like protein |
Protein accession | YP_003275944 |
Protein GI | 262118174 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCACTG CCGCCACCCG CCGCCGCGAA GCCGGACAAC ACCCACCCAC CGCCGCACCA CTGGTGGCGG TGGTGGCCGC GATCGCGGTG ACCGCCGTGT TCTACCTGAG TCTGCGGGTG GGGCACTGGT GGACCCGATC GCCGGCAGCC ATTCCGGCCA ACCCCGTGCG CGCGCTGCTC GAAGTCACCC AGGGCCGACT AGCCTGGCCC ACCGCTTCCA CCGTGCTCGT CGTGCTGCTC GGTGGCATCG GCGTGCTGGC CGTCGCCGCC GTCACGGTCA GCCGCACCCG AGATGGCCGG GGACGGGAAC GGGATTTCGA CCGAGCGGCA CCGTTGATGG CCACCGCACG TGAACTCTCG GCCGTGACCG TCAAAGAGGC CCGCGCCTCG GCGACGCGGC TGCGCCGCGA CCTCGCCGGG CAACGGCCGG GATTCCTCGA TTACGGGCTG CTGCTCGGCC GCCTGGCCGG ACCGTCCTCG GTACCGATCT TCATGCTGTG GGAATGGGTC GGCCTGGTCA TCGGCGGACC CCGCTGCGGC AAAACATCGG CGATGGTCAT TCCCATGGGC TGTCAGGCAC CCGGCCCGGC GGTGCTGACC TCCAACAAGG CCGACATCTA CGACGCCATC CGGTACGTCC GCGACGCCGA CTTCGATCCG CACGCAGCCA GCTACACACT CGGCAGACCA CGACAGCAGC GGTGGTTCAC CCGCTGGTGG AACGGGATCA CCGTCACCGC CCACGATCCC GGAATACGTG GACACCTGGG CCGCTGGCAT GTGCGGCGCG TGATCCGTGC GCGGCGCAAC GCCGTCCAGG GCCGCATCTG GGTATCCGAT CTGCAACACA TCGCCAGCGC CGAAGGCCAG CAGTGGTGGT GGGACCCGTT CTGGGACATC GACGACCTCG CCGATGCCCG CGAACTCGCC GCCATCTTCA AAGGCGCCTC GACCGAGTCC TCGGCACGCG TAGATGCCTA TTTCGACGGT GGGGCACAAG AACTCCTCGC GCTCTACATT CTCGCTGCCG CCTGCGGTGG CGGCGATCTC AAGCACGTCG ACGGATGGCT GACCGACCCC AAGCTGCAAC TTCCCCGCAA CCTGCTGATC CAGCACGGGC ATGCCGACGC AGCCGCGAAA ATCTATGCCG CCCAGGACCT CAACAAACGG CAACAAGACG GCCTCTACGA CATGGCCCGC CGCTTCATCA ACATCATGAC CGTCCCGAAA TATGCGTGCA CCGTCCTGCC ACCGCGGCGG GTGCAGTTCG CCGGTGACAA CACCGTCGGC AACGCCGACC TGCACCACAA CCTGCCAGCC TTTGACCCGC AACAGTTCGC GCAGTCGACC GACACCCTGT TCGCGCTCTC CAAAGAAGGT GCCGGTGCGG CCACCGCACT GACCACCGCG CTGGCCGATT CGGTGTTCAA AGCCGCCACC GCGATCGCCG AACAGCACGG CGGGCGACTG CCCACCCCGA TGGTGGCGTT ACTCGACGAA GCCGCCAACG TGTGCAAACT TCCCGAATTA CCCGACTGGT ACTCGCATTT CGGTAGCCGC GGCATCGTCG TGGTCACGTT CCTGCAGTCC TTGGCCCAGG CGTCCAAGGT GTGGTCGGCC GAGAAGCTGG ACATGCTCAA AGACGCATCC AACGTCTACT ACTTCGCCGG CAACTCCAAC AGCACCCCCT ACCTCGAATC ACTGGTCCGC ATGATCGGCA CCCGCGATGT GCGCCGCGTG ACCCGCAACC GTAATGGCAG CGGCGGTGTC GGGTCATCGT CGATCAGCGA GAGCTGGTCC TCAGAACCCA TCCTCGATGT GGCCGAACTC GGCGCCATGC CCGACACCCG TGCGGTGGTC AAGACCTCAG GCAACCGGGT GCTGCTGCTC AAGAAGAACT CCTACTGGAA AGGCCCGTTC CGCCACGCCT GCCACGCCTC GGAAAGTGCC GCCAAAGCCC AACGAATCGC TGCCGGGCTA CCCCTCGACG GACAAGGAGC TGCCGCATGA
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Protein sequence | MVTAATRRRE AGQHPPTAAP LVAVVAAIAV TAVFYLSLRV GHWWTRSPAA IPANPVRALL EVTQGRLAWP TASTVLVVLL GGIGVLAVAA VTVSRTRDGR GRERDFDRAA PLMATARELS AVTVKEARAS ATRLRRDLAG QRPGFLDYGL LLGRLAGPSS VPIFMLWEWV GLVIGGPRCG KTSAMVIPMG CQAPGPAVLT SNKADIYDAI RYVRDADFDP HAASYTLGRP RQQRWFTRWW NGITVTAHDP GIRGHLGRWH VRRVIRARRN AVQGRIWVSD LQHIASAEGQ QWWWDPFWDI DDLADARELA AIFKGASTES SARVDAYFDG GAQELLALYI LAAACGGGDL KHVDGWLTDP KLQLPRNLLI QHGHADAAAK IYAAQDLNKR QQDGLYDMAR RFINIMTVPK YACTVLPPRR VQFAGDNTVG NADLHHNLPA FDPQQFAQST DTLFALSKEG AGAATALTTA LADSVFKAAT AIAEQHGGRL PTPMVALLDE AANVCKLPEL PDWYSHFGSR GIVVVTFLQS LAQASKVWSA EKLDMLKDAS NVYYFAGNSN STPYLESLVR MIGTRDVRRV TRNRNGSGGV GSSSISESWS SEPILDVAEL GAMPDTRAVV KTSGNRVLLL KKNSYWKGPF RHACHASESA AKAQRIAAGL PLDGQGAAA
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