Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_4452 |
Symbol | |
ID | 8553834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | - |
Start bp | 4764587 |
End bp | 4766266 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | VanW family protein |
Protein accession | YP_003275478 |
Protein GI | 262204270 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTACCG GCCACCGCGC GCGCAACGGC GCCCGGACCC TCGTGGTGGT GGTCTCTGTT GCCTGTCTGG TCCTTGCTGC CGACATCGTC CTCACCGGCT CGGCGTCGGC GCGCGATGTC ACGATCGCCG GACTCGACGC GGGCAATCGG CAGGCCGACG AGCTCGACCC GATCCTCGCC GAGCTGTCGC ACCGTGCCGC GCAGCCCGTC GTGGTGACGA CCGACTCCGG GGCGGCCGAG CTCGACGCCG CCGAGCTTGG CCTGTCCTTC GACCCCGAAG CCACCCGGGC GCGGTTGTTG GAGCACTCCG CCAATCCGTT GCGACGTCTG TCGGCGCTCT TCGGTCGCGA CCACGAGGTG GAGCCGGTGA TCCACCTCGA CCGCCGGGCC ATGGACGCAA CACTGGATTC GCGACGCACC ATCCTCGAAC GCGCGGCCGT CGAGGGCGGG GTGCACTACG CGGGTGCCGA GCCCCGCCCG GATCGTCCGG CGGCAGGTCT GCGCATCGCC CGCGACGAGG CGGCGCAGGT ACTCACCGAT CGCTGGCTCG ACGCGGCGCC CATCGCCCTG CCGATGGAGC CGTTCGCCCC GACCGTCTCC TCGGAGGTCG TCGACGCAAC CGTCGCCGGC CCGGCCAAAC GTGCCACCGA GTCACCACTC GTGCTCACCG CGCGGCGTGG AGCACGGGTG GAGGTCTCGC CCGAGGACCT CGGCGGCGTC CTCACCTTTG TCGCCGACGG GCGCGGCGGC CTGAAGCCCA GCGTGGACCC CGGCCTGACC CGCGGGTTGC TCACCGACAA GCTGGGACGC ACCCAGAGCG CGGCCCGCAA CGCCACGTTC TCGCTGTCGG GCGGCACGCC GCGGGTGGTG CCCTCGGCCG ACGGTGCCCG CATCAACTGG GCCAAGACCG CCGAGGCGAT CGCGGCGGGC GTCCTCGCCG ATGACGACCG CACCGTCGAG GTCGCCTACG ACGTCGTCGC CCCCCGCCTC ACCACCGACG CCGCCCGTCG GCTCGGCGTG AAGGAGGTGG TCAGCGAGTT CACCACCGAC GGCTTCAGCA GCGCGTCGGG CGAGAACATC AGGCTCGTTG CCGCCGAGGT CGACGGTGCA CTCGTCCTGC CCGGAAAAGT GTTCTCCCTC AACGGACACA CCGGTCCGCG CGGCACCGCG CAGGGGTACG TGACGTCGAC GATCATCGAT CACGGACGCC CCGCGAAGGC GGTGGGTGGC GGCATCTCGC AGTTCGCCAC CACGCTCTAC AACGCGGCGT ACTTCGCCGG ACTCGAAGAC GTCGACCACA CCGAACACGC CTATTACATC TCGCGCTACC CCGAGGCGCG CGAGGCGACG GTGTTCGAGG GCGCCATCGA CCTCAAGTTC CGCAACAACA CCCGCCACGG CATCTATATC GAGACCAGTT GGTCCCCGTC GGCGGTGACC GTGCGGTTGT GGAGCACCAA GACCGTGGAC GTCGAGTCGA TCACCGGCGA GCGCACCTCC TACACGACAC CCGACCGGGT CACGGTGCCC CGCGGCGACA ACTGCATCGC GAGCAGCGGC AGCCGGGGGT TCATCGCCTC CAACACCCGC ATCATCCGCG ACGCCGCGAC CCGAGCGGAG ATCTCCCGGC ACACCCGCAC CGTGCGCTAT GCGCCGGAGC CGATCGTCGT GTGCCGCTGA
|
Protein sequence | MSTGHRARNG ARTLVVVVSV ACLVLAADIV LTGSASARDV TIAGLDAGNR QADELDPILA ELSHRAAQPV VVTTDSGAAE LDAAELGLSF DPEATRARLL EHSANPLRRL SALFGRDHEV EPVIHLDRRA MDATLDSRRT ILERAAVEGG VHYAGAEPRP DRPAAGLRIA RDEAAQVLTD RWLDAAPIAL PMEPFAPTVS SEVVDATVAG PAKRATESPL VLTARRGARV EVSPEDLGGV LTFVADGRGG LKPSVDPGLT RGLLTDKLGR TQSAARNATF SLSGGTPRVV PSADGARINW AKTAEAIAAG VLADDDRTVE VAYDVVAPRL TTDAARRLGV KEVVSEFTTD GFSSASGENI RLVAAEVDGA LVLPGKVFSL NGHTGPRGTA QGYVTSTIID HGRPAKAVGG GISQFATTLY NAAYFAGLED VDHTEHAYYI SRYPEAREAT VFEGAIDLKF RNNTRHGIYI ETSWSPSAVT VRLWSTKTVD VESITGERTS YTTPDRVTVP RGDNCIASSG SRGFIASNTR IIRDAATRAE ISRHTRTVRY APEPIVVCR
|
| |