| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_4099 |
|---|
| Symbol | |
|---|
| ID | 8553480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 4400988 |
|---|
| End bp | 4401818 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | transcription activator effector binding protein |
|---|
| Protein accession | YP_003275157 |
|---|
| Protein GI | 262203949 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCA TCGGAGATTT CGCCACAATG GGTCGGGTGT CGATCCGGAT GCTTCGGCAC
TACGACCGGA TCGGCCTGTT GCCGCCGGCT CGGGTCGACG AGTTCACCGG GTATCGGTAC
TACACCGCCG ACCAATTGCG TCGACTGAAT CGTGTTGTCG CGCTGAAGGA TCTGGGGTTC
ACGCTTGCCG AGGTGGCCCG AATCCTCGAC GCCGACGTGG CGCCCGCCGA ACTGCGCGGA
ATGCTACGTC TGCGTCGAGC CCAGGTGGCC GAGCAGATCA CGGCCGACCA GGATCGGCTG
ACCCGTATCG AGGCGAGACT CCGAATGATC GAGAAGGAAG GCACCATGAG TACCAACAAT
GTGACCGTGA AGAGTCTCGC GGCGGTTCGG GCCGCGACGC TGTCCGACAC CGCGGAGAGC
ACCACGAGCG ACGTCATTGG TCCGGTGATC AGCCGGTTGT TCGCCACCCT GTACGAGGCG
GTCATGGGCA GTGGCGGCGT GCCGGCGGGC CCGGCAGTGG CCACGTACGC ACCCGCCGGC
GGGGACGCGC TGATCGTGAC GGCTGCGTGT CCCATCGACG ACGGTCCGAC GGTGAGCTGC
GTCGACGGTC TGGACGTGGT GACGCTGCCG GGCACCGAGC AGGCGGCCAC CTATGTGCAT
CACGGCCGGA TGGCAGACAT CGGTGAGGGC TATCAAGCGC TGGCCACATG GATCGAGGAC
AACGGGTACC GGACCGACGG CACTGCTCGG GAGACGTACC TGGTGGGGTA CCCCGAGCCG
GAAGATGCCT GGCTGACCGA ACTCGCGATG CCGATCGTCG CCCTCGGTTG A
|
|---|
| Protein sequence | MFTIGDFATM GRVSIRMLRH YDRIGLLPPA RVDEFTGYRY YTADQLRRLN RVVALKDLGF
TLAEVARILD ADVAPAELRG MLRLRRAQVA EQITADQDRL TRIEARLRMI EKEGTMSTNN
VTVKSLAAVR AATLSDTAES TTSDVIGPVI SRLFATLYEA VMGSGGVPAG PAVATYAPAG
GDALIVTAAC PIDDGPTVSC VDGLDVVTLP GTEQAATYVH HGRMADIGEG YQALATWIED
NGYRTDGTAR ETYLVGYPEP EDAWLTELAM PIVALG
|
|---|
| |