Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_3950 |
Symbol | |
ID | 8553331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | - |
Start bp | 4245888 |
End bp | 4247036 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | virulence factor Mce family protein |
Protein accession | YP_003275017 |
Protein GI | 262203809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.681404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGACGGA CGGCAGCAGT GGTGATGGTC GGCCTGCTGC TGGCCCTGAT CATCGGTGCG ACAGCGCAGT TCCTGGGTTG GTTCAGCGGC ACTCAGCAGG TGACCCTGGT GGCGCCGCGC GCCGGTCTCG TGATGAATCC CGACGCCAAG GTCAAGCTGC GGGGCGTCGA GGTCGGCCGG GTCCAGAAGA TCAGTGAACG CGACGGTCAT GCCGTGCTCA CCCTCGACAT CGACGACGCC TCGATGTCCA AGATCCCGGG CAACGTGACC GCGGACATCA AGTCCAACAC CATCTTCGGT GCCAAGGCGG TCAGTCTGGA CATCCCGCCG CAGGGTCCGC AGGGGCATCT GAGCGCCGGT GCCGAGATCA CCGCCGACCG GGTGGTGGTG GAACTCAACA CCGTCTACCA GCAGCTGGTC TCCGTGCTCG CCCAACTGCA GCCGGAGAAA CTGAACGCGA CGCTGGGTGC CATCAACACC GCACTGTCCG GCCAGGGTGC CCGCATCGGC GTCGCGCTCG ATCAGCTCTC GGGTCTGCTG GGCAAGACCA ATCCGCACCT GCCCGAGCTG AACCGGCTGT TCCGCGAGGG GGCCACCGTC ACCAACGTGT ACGCCGACTC GATGCCCGAC CTGCTGCGGA CCGTCGACAA CTTCACCACC GTCGGCAACA CGCTGGTGGA CAAGTCCACC AACCTCGATG CGCTGCTGAT CAACACCACC GGGATGGCGA ACACCATCGA CGGCGTGATC GCACCGACCA AGCGGACGCT CATCTCGGCG CTCACCGACA TCGGGCCCGT CGCACAGTTG CTCGGCTACA ACGCGCCCGG CATCAAATGC TTCATCACCT CCACCGCGTC GGCCGCGCAG GTCGCCGAAC CCTACCTCGG CGGCAACAAC GGCACCCTCA TGCTCGACGC GAGCATCTTG CCCGGCAAGG ACCCGTATCA GTACCCGTAC GATCTGCCGC AGGTCCGCGC CTACGGACCC CCGACGTGTG AGGCAGGACT GGGTAATCCG TCGTCCACCG AACACGTCAA GTTCTATGTG AGCGACAACG CCAACTACCC GTACCAGCCG AGGACGACGC CGAAGGTGAA CTCGCAGAAG CTCTTCCAGC TATTGTTCGG TGAGCCGCCC CGTGGATAA
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Protein sequence | MRRTAAVVMV GLLLALIIGA TAQFLGWFSG TQQVTLVAPR AGLVMNPDAK VKLRGVEVGR VQKISERDGH AVLTLDIDDA SMSKIPGNVT ADIKSNTIFG AKAVSLDIPP QGPQGHLSAG AEITADRVVV ELNTVYQQLV SVLAQLQPEK LNATLGAINT ALSGQGARIG VALDQLSGLL GKTNPHLPEL NRLFREGATV TNVYADSMPD LLRTVDNFTT VGNTLVDKST NLDALLINTT GMANTIDGVI APTKRTLISA LTDIGPVAQL LGYNAPGIKC FITSTASAAQ VAEPYLGGNN GTLMLDASIL PGKDPYQYPY DLPQVRAYGP PTCEAGLGNP SSTEHVKFYV SDNANYPYQP RTTPKVNSQK LFQLLFGEPP RG
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