Gene Gbro_3888 details

Gene Information

• Locus tag: Gbro_3888
• ID: 8553269
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: -
• Start bp: 4181170
• End bp: 4183203
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 68%
• Product: urea amidolyase related protein
• Protein accession: YP_003274957
• Protein GI: 262203749

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0446544
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACAATCA CCAGCACGGC AATCACCGTC TTACGCGCGG GTGCGCTGAC CACCATCCAG 
GACTGGCCCG GCCGCATCGG CTACTGGAAA GTCGGTGTGC CGCCGTCGGG TCCGATGGAC 
GACCTCTCGT TCCGGCTCGC CAACATCGCG GTTGGCAACC CGGCATCCGC CGCCGGCCTC 
GAGGTCACCA TGGCGGGCCC AGCGCTGCGC TTCGACGACA CGGCTGTGGT CGCCGTGACC 
GGTGCGCCGG CCCCGGTGAC CATCGACGGA AAGCCGGTGC CCCAATGGGT TCCGCTCACA 
GTCGACGCGG GCTCGGTTCT CGACGTGGGA GCCGTCGGAT CGCTGGGCAT GCGGGTCTAC 
GTCGCCGTCG CCGGCGGCAT CGACGCCGAG GAGTACCTGG GTAGCCGATC CACCTTCACC 
ATGGGGCGGT TCGGCGGCAA GGACGGTCGG CGTCTGGAAG ACGGCGATCG GCTCAGCACC 
ACCTCGCTCC CGGAGGTGCG AACTCGTCGC CGCATCCTCT TCGACGAGCA GCCCGCATTC 
TCCAACGCAT GGCAGCTCGG CGTCACCGTC GGCCCGCACG GTGCGCCGGA GTTCTTCACC 
CCCGAGGACA TCGACGATCT GTTCGCCACC GCGTACGAGG TGCACTTCAA TTCCGACCGC 
ACGGGTGTGC GGCTGATCGG ACCGCAGCCG CGGTGGGCGC GGACCGACGG GGGTGAGGCG 
GGTCTGCATC CGTCGAACAT CCACGACAAC GCGTATTCGG TTGGTGCGCT GGACTTCACC 
GGCGACACCC CGATCCTGCT CGGGCCCGAC GGTCCGAGTC TGGGTGGGTT CGTGTGCCCG 
GTGACGGTGG CCAGCGCGGA GCGGTGGAAG CTCGGTCAGC TCAAGCCCGG TGACACGGTC 
AGGTTCGTCG CCGTGCGCAG TGAGCACGCG GCGTCGCCGC AGCAGGTGGG GCTCGGTCGT 
CGGGCAACGT TCACGTCCGT GCTGTCCACC GGCGGTGACG AGGACAATGG CATCCTCGGC 
ACCTCGTCGA CGGCCGACGG TGACACGGCT GTCACCTACC GGCGCAGCGG CGACGACAAC 
ATCCTCGTCG AGTACGGCGA CATGCGTCTC GATCTCGCGC TGCGGGCCCG TGTCCATGCA 
CTGAGTGAGC GAATCGAGGC CGAGAAGCCC AGGGGGCTCA TCGATCTGAC GCCCGGTATC 
CGGTCTCTGC AGGTCAAGGC CGACCCGGAC GTGTGGTCAC AGCAGCAGAT GCTGGAGTGG 
TTGCGCGAGT GCGAATCCCA ACTGCCTGCC GCGCAGGATC TGGTGGTGCC CAGCCGTACC 
GTGCATCTCC CGTTGTCGTG GGACGATCCG GCCACCCGGG AGGCCATCGA GCGATACATG 
CTGGGGGTGC GTTCTGACGC GCCGTGGTGC CCGTGGAACA TCGAGTTCAT CCGCCGGATG 
AACGGACTGG GTTCCGTCGA CGACGTGTAT CGCACCGTCT TTGACGCCAG CTATCTGGTG 
CTGGGCCTCG GGGATGTGTA TCTCGGTGCG CCGGTGGCTG TTCCGCTGGA CCCGCGGCAC 
CGGTTGATCA CCACCAAGTA CAATCCGGCG CGCACCTGGA CACCGGAGAA CGCGGTCGGG 
ATCGGCGGCG CGTACCTGTG CATCTACGGC ATGGAGGGCC CGGGCGGCTA CCAGTTCGTC 
GGCCGCACCA CCCAGGTGTG GAATCACCGG CATCCGCTTC CCGCACCGGG ATTCGACCCC 
GAGCACCCGT GGTTGCTGCG CTTCTTCGAC CAGATCCGCT GGTATCCGGT CAGTGCCGAG 
GAGTTGCTGG ACATGCGGGC CGACGTTGCG GCCGGCCGTG GTGAGTCGAC CCGGATCACC 
GACGGTACGT TCTCGCTCGC GGAACACCAG CGGTTCCTCG ACGCCAATGC CGACGACATC 
GTCGTCACAC GGGAGGCCAT GGAGATTGCG CGCGCCGAGG AGCGTCGGCG CTGGTCGCTG 
CAGGGCGAGT TCGCGGTCCG GGGCGACGAT ACTGTCGAAG GGAAAGTGGC ATGA 

 

Protein sequence

MTITSTAITV LRAGALTTIQ DWPGRIGYWK VGVPPSGPMD DLSFRLANIA VGNPASAAGL 
EVTMAGPALR FDDTAVVAVT GAPAPVTIDG KPVPQWVPLT VDAGSVLDVG AVGSLGMRVY 
VAVAGGIDAE EYLGSRSTFT MGRFGGKDGR RLEDGDRLST TSLPEVRTRR RILFDEQPAF 
SNAWQLGVTV GPHGAPEFFT PEDIDDLFAT AYEVHFNSDR TGVRLIGPQP RWARTDGGEA 
GLHPSNIHDN AYSVGALDFT GDTPILLGPD GPSLGGFVCP VTVASAERWK LGQLKPGDTV 
RFVAVRSEHA ASPQQVGLGR RATFTSVLST GGDEDNGILG TSSTADGDTA VTYRRSGDDN 
ILVEYGDMRL DLALRARVHA LSERIEAEKP RGLIDLTPGI RSLQVKADPD VWSQQQMLEW 
LRECESQLPA AQDLVVPSRT VHLPLSWDDP ATREAIERYM LGVRSDAPWC PWNIEFIRRM 
NGLGSVDDVY RTVFDASYLV LGLGDVYLGA PVAVPLDPRH RLITTKYNPA RTWTPENAVG 
IGGAYLCIYG MEGPGGYQFV GRTTQVWNHR HPLPAPGFDP EHPWLLRFFD QIRWYPVSAE 
ELLDMRADVA AGRGESTRIT DGTFSLAEHQ RFLDANADDI VVTREAMEIA RAEERRRWSL 
QGEFAVRGDD TVEGKVA