Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_3885 |
Symbol | |
ID | 8553266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | - |
Start bp | 4175608 |
End bp | 4177458 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003274954 |
Protein GI | 262203746 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00215112 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGGT TGGGGCGCAA CGCGATTCGG CACGCGGAGA AAGATGCACG CCGTCGCAAC CGCCAGGAGA AGCGTGGGCG GCGGGTTGCA GCGAGCGTCG CCGCGTTGGC GACGGTGGCT GCCGTGGGCG CGGGGCAGGC GATGTCGCAT GCGCCTGCTC AGGCGGCACC TCAGTCCGTT GTGAACCAGT TACTGGACAA GCTTGATACA TATGGAGATA TCAGTCTTGA TCCGGCCGCC AATCTGGGTG ACCTTCTCGG GACGATCATC AATAATCCGG CTTCGCAAGG GCTGCTGGAT CAATGGCGTA TCCAGGCGTG CGCATCGGGC GGCGCGTCTG GTGGGGCTGA CTGTAGTAGC TCGACCGGGA CCGGTATCGC TTTGGTCCTT CCCGATTCTC TAGAGGTCGT GCCTAACTCG GTATACGGCC CAGCCCGAGG GGTGATCAAC AGTGCTCTTG TGCAGGGTGC CCTTCACCTG ATTGGCATCT ACTATGTGGT GCCCCCTGGG CCCGGAACCT CCGGAACCGC AACGGTTATC GGGTCAGGCT TCCAGTTCGC GGTTGCATAC CGCGGCGGTG AAGCCACCGC GATTTCGTAC CTACCGGTGA GTCTGGCAAC GGCGGGCGCT AGCGACGGGA AGAAGGCATA TGCGTTCGCC ATCGTTGGTG TTGCGAACGC CTGGAATACC GGAGACCTAC CCGTGACTGT GCTTGGCAGT GAGATCGATA GCATCCCCGG AGTGCAGTCC GTCGGGTGTT ATGGAGGTCT CACCGGCGCG TACGCGGAGG GAGTGGGCGC ATGCGCGAAC GTGCTGGGGA CGCTGGACTT TCGGTGGGAC GCAACCAACA ATCAGGTGCA GTTCGGCCTG ACCGACCCTA CCAAAGTGCT GTTCGATCCG ACTGGTGTCG TCGGGGAGTT GATCACAAAG CTCATCGGTG GCCAGGATCT GAATTTGAGT GATCTGCTGA GCGATGACTT CGCACGCCTG ACCATCTCTC CCGAAGAGTT GCTCAACGGC GACTTCCTCC GCCTGACGAG CTCCTACGGA CTCACCGACC TGATCACCAT CGACTGGTTG GGTCAGAAGC TGACGCTGTA TCCGGAGACG ACGGTCAATG GTGCGACGAG CCCCAATTAC CTTGGGCTGC CACAGATCAC CTTCAGCACG CTCGACACCG GTGAGATCAT CCCCGTCCTC CAACTCCCCA AGTCCACGTT CCCCTTCGGC ATCCCGTCCG TCGGTCCGTA CGTCATCCCG AGCACCACGA CCACGACCGT CAACGCGTTG TCCACCACGA CCTCGGAAAC CGACTCCCCG TCGTTGCTGC GCGGGGTGGC GAACACGGAT AAGGTCGCCG AAACAGTAAC GGACACAACG GAAACCACCG GAACACCGGA GGTGACCCCC GAGACGCCGA CCCCCGAGCC GACGATCACG AACACCGACA CCTCGACCTC CGACAGCGAC TGCACGGATC AAACCGAGGG ATACGTCGGT CGGCACCGTG CCGACAACAA GCACGACGGG TCCGGCTATC GGGGTCGGCA CCGTGCCCAC GAGTCGGACG ACGCCACCTC CGACAACTCG ACCAAGAACA CGAGCACGTC CACCGATCAT TCCAATGACA GCGGTGGGTC CGGCGGCAAC AAGGACTCAA GCGACACCAG CGGCTCGGGC AACGGCAGCG ACTCAGGCAA CGGCAGTGGC TCAGGCAACG GCAGCGGCTC AGGCAACGGC AGCGACTCAG GCAACGGCAG CGACTCAGGC AACGGCAGCG GCTCCGGTGA CGGCGACTCG GGCAACAGCG GTTCGGGCTC GGGCAACAGC GGTTCCGGCG ACGGCAGCTA G
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Protein sequence | MTRLGRNAIR HAEKDARRRN RQEKRGRRVA ASVAALATVA AVGAGQAMSH APAQAAPQSV VNQLLDKLDT YGDISLDPAA NLGDLLGTII NNPASQGLLD QWRIQACASG GASGGADCSS STGTGIALVL PDSLEVVPNS VYGPARGVIN SALVQGALHL IGIYYVVPPG PGTSGTATVI GSGFQFAVAY RGGEATAISY LPVSLATAGA SDGKKAYAFA IVGVANAWNT GDLPVTVLGS EIDSIPGVQS VGCYGGLTGA YAEGVGACAN VLGTLDFRWD ATNNQVQFGL TDPTKVLFDP TGVVGELITK LIGGQDLNLS DLLSDDFARL TISPEELLNG DFLRLTSSYG LTDLITIDWL GQKLTLYPET TVNGATSPNY LGLPQITFST LDTGEIIPVL QLPKSTFPFG IPSVGPYVIP STTTTTVNAL STTTSETDSP SLLRGVANTD KVAETVTDTT ETTGTPEVTP ETPTPEPTIT NTDTSTSDSD CTDQTEGYVG RHRADNKHDG SGYRGRHRAH ESDDATSDNS TKNTSTSTDH SNDSGGSGGN KDSSDTSGSG NGSDSGNGSG SGNGSGSGNG SDSGNGSDSG NGSGSGDGDS GNSGSGSGNS GSGDGS
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