| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3870 |
|---|
| Symbol | |
|---|
| ID | 8553251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 4161520 |
|---|
| End bp | 4162299 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003274939 |
|---|
| Protein GI | 262203731 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGG GTGGCCGGAC CGTCGTCGTG ATCGGCGGCG CCTCCGGAAT CGGGCTCGCG
ACCGCGAGAC GCTTTGTGGC ATTGAACGAT CGGGTGGTGA TCGCCGACGT CAACGCCGAC
GCCGCGGCCG CTGCTGCCGC CGAACTGGGG CAATCAGCAA CATCGCTGCA TCTCGACGTC
ACCGACGAGG GCTCCGTCGC CGCCGGATTC GACGGTCTCG ACCGCGTCGA CGCCGTCGTC
AACTGTGCCG GTCTGTCCGT GCCGGGCGCC ATCACCGAGC TCGAATTGTC GGGTTGGCAG
ACGACCATCG ACGTCTGCCT CACCGGTAGC TTCCTGGTTC TCAAACACGC CGGTCGCTGC
GTCGTGGACG GGGGCAGCAT CACCGTGATC GCGTCGCTGA ACGGGCGGCA ACCGGGCGCC
GGCATGGCCT CATACTGTGC AGCCAAAGCC GGTGTTCTGA TGCTGGTGGA GGTCGCGGCA
CTCGAACTCG CCGAGCGCGG CATCCGCGTC AACGCCATCT CACCCGGCCT CGTCGAGACA
CCGCTGACCG CGGGAATCGC CTACGTACCG GGCCTGCACG AGGAGTACCT GGAGAACACA
CCTCTCGGCC GGCCCGGCCA GCCCGACGAG ATCGCCGCGG CCGCAGTCTT TCTCGCATCC
GACGACGCGC GTTGGATGAC GGGTGCCGCA CTCGATCTCA ACGGTGGAGC GCACCTCAAG
AGGTATCCCG ACGTGCTCGG CAGGGTGCGT GCCATGATGG CGACCCCGCC TGCCGGCTGA
|
|---|
| Protein sequence | MTGGGRTVVV IGGASGIGLA TARRFVALND RVVIADVNAD AAAAAAAELG QSATSLHLDV
TDEGSVAAGF DGLDRVDAVV NCAGLSVPGA ITELELSGWQ TTIDVCLTGS FLVLKHAGRC
VVDGGSITVI ASLNGRQPGA GMASYCAAKA GVLMLVEVAA LELAERGIRV NAISPGLVET
PLTAGIAYVP GLHEEYLENT PLGRPGQPDE IAAAAVFLAS DDARWMTGAA LDLNGGAHLK
RYPDVLGRVR AMMATPPAG
|
|---|
| |