| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3820 |
|---|
| Symbol | |
|---|
| ID | 8553201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 4105243 |
|---|
| End bp | 4106892 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | helix-turn-helix Fis-type |
|---|
| Protein accession | YP_003274891 |
|---|
| Protein GI | 262203683 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCATCG ACACACTGAC GGAATCCGAC CACACGCCGC AGCGCCCGGT GATCGCGCAC
TCGTGGCGGC GGTCGAAGCT GTGCGGGATC AATCCCGACG ACGCCCCGCC GACCACCGCC
GTCGACATCG CGGCGGCCGA CCCATTGCTC GACGCCGCGC GCCCGGTGCT CGACGCCGCC
GCTCATCGCC TCGCCGATAC CGACTTGTCA CTGCTGCTCG TCGACCACGA ATGTCGCATG
GTCTCGCGAG TCGCGTTCGG CAGCACCGTG GAACGTACCC TCGATGCGCT CGGCGCCACC
CCGGGCATCC CGTTCGGCGA GGAAGCGGTC GGAACCACTG CGCTCGGGAC TCCCGCCGAG
GTGCGCGGAC AGGTCATGGT CAACGGCTCC GAGCACTACC TCGAACAGTT CAAACACCTC
AGCTGCCTCG GTCAGCCGAT CATCCATCCG GCCACCCGGC GGCTGGCGGG CATCCTCTGC
ATGACCGAGG TCGCCGACCG CGTCAACCCG CTGTCGGTGC CGTTCGTGTC GGGGATCGTC
GCCGACATCG CCGACCGCCT CCTCGACCGC TCCCGCGCCC ACCAGCGTTG CGTCCTCGAC
GCCTTCCAGC GCGCCGCACC TCGCCGCGAT GTGGCCGTCG CCGCCGTCGG TGACGACCTC
CAGCTCACCA ATTCGATGGC GGCAGAACTA CTCTCGGCGA CCGACATCGG GATGCTCCGT
GCCCTGAGCG CTGACCCCGC CCTGTCCGCG GGAACCATGC GGCTGACGCT GGCGTCGGGT
GTCGACGTCG AGATGCTCGT CGAACCGATC GACGGAACCC TCGGGGCGGC CATGTTCCGG
TTCCGGCCCG CACCGCCCGC ACCGGTCGCC GACGCACCGA GTCCCCGCCC GGCCGCACCG
GCACGCGCGG CGAGTATCGC CGTCACCGGT GAACCCGGCA CCGGCCGCAG CACGCAGGCG
CTGTCGCTCG CCGCCGAGCA CGCCGGCGAT CCGCTCGTCG TCGACGTCGC CGATGACCTC
ATCGCCGGCA CACCGCCCGA CGTCGTCGGC CTGATCGCGA CAGCGCGGAC CGAGCACCGA
CCGCTCGTCA TCGACGGCGT CGACCTCCTC GACGACCGGA CCGCTGTCCT GCTCGGCAAG
GCCGCGGCCC TGGCCACCGA CGATCACCCA CTCATCCTGG TCAGCGGACC CCCGACGCAG
GCGGGTGCGG CGGTCTCGGC GCTGCTGGCC CGCTGCGCCA CCCGCGTCGA CCTCCCGCCG
TTACGCCACC GGACCGCCGA GTTGCCTGCG CTGGCCACCA CGATCCTGTC CTCGATCGAT
CCGGACCTGG AACTGTCCGG CCCGGCGGCC GACGCGCTGA TCTGCCAGGA ATGGCCGGGC
AACCTCACCG AACTCACCGC CGTCCTGCAT CACGCGGCCG ACGATTGCGC CGCCCGTCGG
ACCCGGGTTC TCGACCCGGC CGCCCTGCCC GAGCGATACC GCACCACCAG TCGTGCCGCG
CACCTCTCCG GTCGCGAGCA GGCCGAGCGG CAGGCGATCA TCGACGCCCT GGATCGCCAT
GGCCGCAACA AGGTGCACGC CGCGCGCGAC CTCGGCATCA GTCGCACCAC GCTGTATGCC
CGGATGCGGG CGCTGGGGAT CGGCGGCTGA
|
|---|
| Protein sequence | MTIDTLTESD HTPQRPVIAH SWRRSKLCGI NPDDAPPTTA VDIAAADPLL DAARPVLDAA
AHRLADTDLS LLLVDHECRM VSRVAFGSTV ERTLDALGAT PGIPFGEEAV GTTALGTPAE
VRGQVMVNGS EHYLEQFKHL SCLGQPIIHP ATRRLAGILC MTEVADRVNP LSVPFVSGIV
ADIADRLLDR SRAHQRCVLD AFQRAAPRRD VAVAAVGDDL QLTNSMAAEL LSATDIGMLR
ALSADPALSA GTMRLTLASG VDVEMLVEPI DGTLGAAMFR FRPAPPAPVA DAPSPRPAAP
ARAASIAVTG EPGTGRSTQA LSLAAEHAGD PLVVDVADDL IAGTPPDVVG LIATARTEHR
PLVIDGVDLL DDRTAVLLGK AAALATDDHP LILVSGPPTQ AGAAVSALLA RCATRVDLPP
LRHRTAELPA LATTILSSID PDLELSGPAA DALICQEWPG NLTELTAVLH HAADDCAARR
TRVLDPAALP ERYRTTSRAA HLSGREQAER QAIIDALDRH GRNKVHAARD LGISRTTLYA
RMRALGIGG
|
|---|
| |