| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3790 |
|---|
| Symbol | |
|---|
| ID | 8553171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 4072824 |
|---|
| End bp | 4074299 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003274862 |
|---|
| Protein GI | 262203654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.198748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGC CGCAATCGAA GGCAGCTCTG CTGTTCCGCC GCAAGCCTGT CGAAGGCCAG
GGCGCACCCA GCAGCCAACC CGACGAACCC GAGCTCAAGC GCAGCATCGG GACCTTCCAG
CTGACTCTCT TCGGTGTCGG TGCGACCGTG GGCACCGGAA TCTTCTACAT CTTGCCCGAG
GCGGTACCGC AGGCCGGGCC GGCGGTCATC GTCTCCTTCC TCATCGCCGG TCTCGCAGCC
GGACTGGCCG CCATCTGCTA TGCGGAAATG GCTGCCGCGG TGCCGGTTTC GGGTTCCAGC
TACTCCTACG CCTACGCCAC CCTCGGGGAG GTGGTGGCCG TGGGGGTCGG CGCCTGCCTG
CTGCTCGAGT ACGGGGTGTC GGCCTCGGCC ACCGCGGTGG GCTGGGCCCA ATACGTCAAC
CAGCTGCTCT ACAACGTCTT CGACTACCGG CTGCCCGCCG AACTCACCGC CACCCCCTGG
GACAGCACCC CCGGCTGGTT CAATCTCCCT GCGCTCGTGC TCGTGTTCCT GTGCTGTGTG
CTCCTGATCC GCGGTGCCAG CGAATCCGCG CTGGTCAACA CGGTCATGGT GATCATCAAG
CTGGCCGTGC TGGTGTTGTT CATCGCGATC GCGTTCACCG CCTTCACCGC CGACCATTTC
GCCGATTTCG TGCCTGCCGA AACCGGATTC TCCGGCATCA CCTCCGCGGC GGCCGTCATC
TTCTTCACCT TCATCGGCCT CGACGCCGTG TCCACGGCGG GCGACGAGGT GAAGAACCCG
CAGAAGGCCA TGCCCCGGGC GATTCTCGCC GCGCTGAGCA TCGTCGTCAC CATCTATCTG
CTCACCGCGA TCGCGGCGAT CGGAGCCCAG TCCTGGCAGG AGTTCGGCGC CCCCGATCAG
CAGGAGGCGG GGTTGGCCAA GATCGTCGAG AATGTCGTCG GCGCGAGCTG GCCGGGCACC
CTGCTGTCCA TCGGGGCCGT CATCTCCATC TTCTCGGTCA CCCTCGTGGT GCTCTACGGA
CAAACGCGCA TCCTGTTCGC GATGGGCCGG GACGGCCTGC TGCCCGCGAT GTTCGCCAAG
GTCAACCGCA AGACGATGAC CCCGGTCAAC AACACGATCG TCGTGTCGGT GATCGTCGGG
CTCCTGGCCG CCATCGTGCC GCTCGACAAG CTCATCGATC TCGTGTCCAT CGGCACGCTG
GTCGCGTTCA TCGTCGTCTC GGTGGGCGTG ATCGTGTTGC GGCAGACGGC GCCCGATCTC
CATCGCCCGT TCCGGGTGCC GCTGTACCCG GTGACGCCTG TGCTGGCGGT CGCGGCGTGT
ATCTGGATTC TGTCCGGGCT GCACTGGTAC ACCTTCGTGT GGTTCGCGCT CTGGGTGGGC
GTGGCGATGC TCTTCTACGT CTTCTGGGGA CGTCACCACA GCAAGCTCAA CCATCCGCCC
ACCGACACCG TCCGTTTCGA GAAAGGCGTG TCGTGA
|
|---|
| Protein sequence | MTQPQSKAAL LFRRKPVEGQ GAPSSQPDEP ELKRSIGTFQ LTLFGVGATV GTGIFYILPE
AVPQAGPAVI VSFLIAGLAA GLAAICYAEM AAAVPVSGSS YSYAYATLGE VVAVGVGACL
LLEYGVSASA TAVGWAQYVN QLLYNVFDYR LPAELTATPW DSTPGWFNLP ALVLVFLCCV
LLIRGASESA LVNTVMVIIK LAVLVLFIAI AFTAFTADHF ADFVPAETGF SGITSAAAVI
FFTFIGLDAV STAGDEVKNP QKAMPRAILA ALSIVVTIYL LTAIAAIGAQ SWQEFGAPDQ
QEAGLAKIVE NVVGASWPGT LLSIGAVISI FSVTLVVLYG QTRILFAMGR DGLLPAMFAK
VNRKTMTPVN NTIVVSVIVG LLAAIVPLDK LIDLVSIGTL VAFIVVSVGV IVLRQTAPDL
HRPFRVPLYP VTPVLAVAAC IWILSGLHWY TFVWFALWVG VAMLFYVFWG RHHSKLNHPP
TDTVRFEKGV S
|
|---|
| |