Gene Gbro_3608 details

Gene Information

• Locus tag: Gbro_3608
• ID: 8552988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: +
• Start bp: 3832642
• End bp: 3834651
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 67%
• Product: thiamine pyrophosphate protein central region
• Protein accession: YP_003274690
• Protein GI: 262203482

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.908775
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCACCGA TCAATCAGGG ACGCGCCGGC GGCCTCACCG GCGTCCGGAC TCCCCACGGT 
GAGCCGACGG TCCGTCTGAC CGTTTCCCAA GCGACCGTCC GGTTCCTCGC CAATCAGTAC 
GTCGAACGCG ACGGAGAACG CACCAAGTTC TTCGCCGGGT GCTTCGGCAT CTTCGGCCAC 
GGCAACGTGG CCGGCCTCGG ACAGGCGTTG CTGCAAAACG AGATCGACGA CGTCGAGGCA 
AACCGTGAGC CGACGCTCAA GTACGTTCTC GGGCGCAATG AGCAGGCCAT GGTGCACTCG 
GCGGTCGGTT ATGCGCGGAT GAAGGACCGG ATGGAGGCGT GGGCGGTGAC CGCCTCGGTA 
GGCCCCGGCT CCACCAACAT GCTCACCGGC GCGGCTCTCG CGACCATCAA CCGGCTTCCC 
GTCCTGTTGC TGCCCGCGGA TACCTTCGCC ACCCGGGCCT CGGCCCCGGT CCTGCAGGAA 
CTCGAACTCC CGTCATCGGG TGACGTCACG GTCAACGACG CCTTCAAGCC GGTGTCCCGG 
TACTTCGACC GCGTCTGGCG TCCCGAACAG CTTCCGGGCG CACTCCTCGG CGCGATGCGC 
GTGCTCACCG ACCCCGCCGA GACCGGCGCG GCCACCGTCG CCATCCCGCA GGACGTGCAG 
GCCGAGGCCT TCGACTGGCC GGAATCGCTG TTCGCCGAAC GCACCTGGCA TGTCGCACGC 
CCGTTGCCCG AACGGCATGT GATCGCCGAG GCGGCCGAAA TCATTCGCTC GGCCAAGCGT 
CCGCTCATCG TCGCCGGTGG TGGTGTCATC TACAGTGGCG CCACCGACTC GCTCGCCGAA 
TTCTGCTCGC GCACCGGAAT TCCGGTGGGT CAGAGCCAGG CCGGCAAGGG TTCGCTGCCG 
TATGACCATC CGCAGTCGGT CGGGGCCATC GGCTCCACCG GCACCACCTC CGCCAATGCA 
CTGGCCGCGC AGGCCGACGT GGTGATCGGG ATCGGCACCC GCTACAGCGA TTTCACCACC 
GCGTCCCGCA CCGCGTTCAC CGGCGACGAT GTCCGGTTCG TCAACATCAA TGTGGCGTCG 
CTGGATTCAG TGAAGCAGGG TGGCTACAGC GTCGTGTCCG ACGCCCGCGA AGCCATCGAT 
GCACTCGACG AACTGCTGGC CGACTACCGC GTCGACGACG CCTACCGCGA GCAGGTGGCC 
ACCCTGGCCC GCGAATGGGA CGACATCGTC GAGGCCGCCT ACTCACCCAC CGCCGTCGGC 
ACCAACGTCG CCACCGGCGA GGAGGCCCTC ACCCAGGGCG CAGTGATCGG TCTGGTCAAC 
GAGACCTCCG ATCCGCGCGA CGTGGTGGTG TGCGCCGCCG GCTCGATGCC GGGCGATCTG 
CACAAGCTCT GGCGCACCCG CGATTCCAAG GGTTACCACG TCGAATACGG ATACTCCTGC 
ATGGGATATG AGGTGGCCGG CGGCCTCGGC GTCAAGATGG CCTGCCCCGA CCGCGACGTC 
TTCGTGATGG TCGGCGACGG GTCGTATCTG ATGATGGCGA CCGAACTCGT CACCGCGGTG 
CAGGAGAACC TGAAGGTGAT CGTGGTGCTG GTCCAGAACC ACGGCTTCGC CTCCATCGGC 
TCACTCTCGG AATCACTTGG CTCCCAGCGC TTCGGCACCG ACTACCGATA CCGCGCCGAC 
AACGGCCGGC TCAGCGGTGC CACGCTGCCC GTCGACCTCG CGGCCAATGC CGCCTCGCTG 
GGCGCCGACG TCATCCGCGC CACCACCGCG GCCGAGTTCG CCGACGCGAT CAAGACCGCC 
AAGGCGGCCG AGGTCACCAC CGTCATCCAC GTGGAGACCG ACCCGTTGAT CGGCGCTCCG 
GACAGCGAAT CCTGGTGGGA CGTCCCCGTT TCCGAGGTGT CGACGCTCTC GTCGACGCAG 
GCGGCCTACG ACGTCTACGC CCAGTGGAAG GCCGTGCAGC GGCCCTACCT CAACCCGACC 
ACCCCCGATA CTGAAGGAGA TCAGAAATGA 

 

Protein sequence

MAPINQGRAG GLTGVRTPHG EPTVRLTVSQ ATVRFLANQY VERDGERTKF FAGCFGIFGH 
GNVAGLGQAL LQNEIDDVEA NREPTLKYVL GRNEQAMVHS AVGYARMKDR MEAWAVTASV 
GPGSTNMLTG AALATINRLP VLLLPADTFA TRASAPVLQE LELPSSGDVT VNDAFKPVSR 
YFDRVWRPEQ LPGALLGAMR VLTDPAETGA ATVAIPQDVQ AEAFDWPESL FAERTWHVAR 
PLPERHVIAE AAEIIRSAKR PLIVAGGGVI YSGATDSLAE FCSRTGIPVG QSQAGKGSLP 
YDHPQSVGAI GSTGTTSANA LAAQADVVIG IGTRYSDFTT ASRTAFTGDD VRFVNINVAS 
LDSVKQGGYS VVSDAREAID ALDELLADYR VDDAYREQVA TLAREWDDIV EAAYSPTAVG 
TNVATGEEAL TQGAVIGLVN ETSDPRDVVV CAAGSMPGDL HKLWRTRDSK GYHVEYGYSC 
MGYEVAGGLG VKMACPDRDV FVMVGDGSYL MMATELVTAV QENLKVIVVL VQNHGFASIG 
SLSESLGSQR FGTDYRYRAD NGRLSGATLP VDLAANAASL GADVIRATTA AEFADAIKTA 
KAAEVTTVIH VETDPLIGAP DSESWWDVPV SEVSTLSSTQ AAYDVYAQWK AVQRPYLNPT 
TPDTEGDQK