| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3120 |
|---|
| Symbol | |
|---|
| ID | 8552491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 3344524 |
|---|
| End bp | 3345780 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | Regulator of polyketide synthase expression- like protein |
|---|
| Protein accession | YP_003274219 |
|---|
| Protein GI | 262203011 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.550646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAC AGCCCCCGGG CATGGACGTG TTCGGCGAGC GCGGCGCGCA CGTCCCTGCC
CCGGCGACGG TGCACGACGC GCTGCCGGAC ACGTTGCTGC GACGCGTGAA GCAGTACAGC
GGGCGGCTGG CCACCGAGGC CGTGCACTCG ATGCAGGATC AGCTCCCCTA CTTCGGGGAT
CTCGATGCCG CGCAGCGCGC CAGTGTCCAG TTGGTCGTGC AGACCGCGGT GGTCAACTTC
GTCGAGTGGA TCCAGGATCC CGAGGGCAAC GTGAAGTTCA CGGTGCAGGC CTTCCAGGTG
GTGCCCCAGG ACCTCGCGCG TCGGATCACG CTGTTGCAGA CGGTCGAGAT GGTGCGCGTC
GCCATGGAGT TCTTCGAGAA GTGGCTGCCG CTGCTCGCCC GCAACGACGC CCAGCTGCGG
GCCCTGACCG AATCCGTCCT GCGGTACGGC CGCGAGATCG GATTCGCCGC GGCGTCGATC
TACGCCTCGG CCGCGGAATC ACGCGGTGCG TGGGACTCCC GGCTCGAGGC ACTCGTGGTC
GACGCCGTGG TCCGCGGCGA CACCGGACCG CAGCTGCTGT CCCGGGCGGC CGCTCTGAAC
TGGGATTCCG ATGCGCCGGC GACGGTTCTC GTCGGAGCTC CACCACCCGA GCAAAATGTG
TCGGTGCCGC TGGCGATCCA CAACACCGCC CGGGCCCACG ACCGGTCGGC ACTGTCGGTG
GTGCAGGGCA AGTTCCTGGT CGCCATCGTC AGTGGGGCGC TCAAACCGAC CGAGAAATTC
ACCAGCGCAC TACTCGAGCA TTTCGCCGAC GGACCGGTCG TCATCGGGCC GACGATGCCC
AACCTGGGCA GTGCGCACGC GAGCGCGACC GAGGCGATGG CCGGGATCGA AGCCGTCGTC
GGCTGGCCGA ACGCTCCCCG GCCGGTGCAC AGTCTCGAAC TTCTGCCCGA GCGGGCGCTG
AACGGAGACG AGTCGGCGAT GGCCGCGTTG AGCGAGTCGT TGGTGCGTCC GCTCGCCAAA
GGCGGGGCGA CTCTGAACAC GACTCTGGAG GCGTACCTCG ACTCGGGAGG GTCGGTCGAA
TCGTGCGCCC GCGTACTGTA TATCCATCCA AATACGGTTC GTTACAGACT GAAGAAAATT
TCTGAAATCA CAGGACGTGA TCCAACTAAC CCTCGCGACG CGTATGTCTT GAGGATCGCG
GCAACAGTAG GTCGACTGAC ACACTTCCGA CACGAATCGT TATCACAAGA AACATGA
|
|---|
| Protein sequence | MNQQPPGMDV FGERGAHVPA PATVHDALPD TLLRRVKQYS GRLATEAVHS MQDQLPYFGD
LDAAQRASVQ LVVQTAVVNF VEWIQDPEGN VKFTVQAFQV VPQDLARRIT LLQTVEMVRV
AMEFFEKWLP LLARNDAQLR ALTESVLRYG REIGFAAASI YASAAESRGA WDSRLEALVV
DAVVRGDTGP QLLSRAAALN WDSDAPATVL VGAPPPEQNV SVPLAIHNTA RAHDRSALSV
VQGKFLVAIV SGALKPTEKF TSALLEHFAD GPVVIGPTMP NLGSAHASAT EAMAGIEAVV
GWPNAPRPVH SLELLPERAL NGDESAMAAL SESLVRPLAK GGATLNTTLE AYLDSGGSVE
SCARVLYIHP NTVRYRLKKI SEITGRDPTN PRDAYVLRIA ATVGRLTHFR HESLSQET
|
|---|
| |