| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_2885 |
|---|
| Symbol | |
|---|
| ID | 8552253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 3084856 |
|---|
| End bp | 3085944 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_003273990 |
|---|
| Protein GI | 262202782 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.566713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCTG ACCTGCGGAT CGGCGTTCTG TACGGCGACG GCATCGGTGC CGAGATAGTG
CCGTGTGCCC TCGCCGCGGT GGACGCCGCC GCAGCGCTCG AGGATGTCGG CATCGAGTGG
GTTGAACTGC CGATGGGGTC GTCGGCGATC TCTTCGCACG GGTCGTCGTT GCCGGCGGAG
AGTCTCGCGG TCCTCGATAC TCTGGACGCC TGGATTCTGG GTCCGCATGA CTCGGCGTCG
TATCCGCCGG AGCATCTGCG CATGCCGAAT CCCAGTGCGC TGTGCCGCAA GCGATATGGC
CTCTACGCCA ATCTGCGACC GTGCCGCGCT TACCCGGGTG TGCCGGCCAC CACCCCCGGC
ATCGACGTGA TGATCGTGCG GGAGAACTCG GAGGGTCTGT ACGCCGACCG CAACATGGCC
GTCGGTTCCG GTGAATTCAT GCCGACCCCG GATGTGGCCC TCGCGGTGGG GGTGATCACC
CGGCAGGCCA CCGAACGTAT TGCACGCCAG GCCTTTGCGA TCGCCGAGCA GCGCTCGCGA
CGGCTCACGA TCGTGCACAA GGCCAATGTC CTGCAGCTCA CGACCGGGTT GTTCCGCGAC
GTCTGCCGCG AGGTCGCCGC CGAGTATCCG GACGTCGTCG TCGACGACAA GCACGTCGAT
GCGATGGCCG CGCTGCTGGT TCGGCGTCCG GCTGAGTTCG ACGTCCTCGT CACCGAGAAC
CTGTTCGGCG ACATACTGTC TGATCTCGCA GCCGAGTTGG CCGGCTCGCT CGGGCTGGCC
GGATCGGTGA ACTGCTCCGC GACCAAGGTG ATGGCACAGG CCACCCACGG GGCCGCGCCG
GACATCGCGG GTCGTGGCGT CGCGAACCCG GTGTCCATCG TCGCGTCGGC CGCGATGATG
TTGCGCTGGT GGGGAAATCG TGACGACGAC CCTCGACTGG CCGCCGTCGC CGATCGCATC
GCGGATGCTG TGGCGGCCAC CTTGGCGTCG GGACTTGCCA CCGCAGACCT GGGCGGCAGC
GCTTCGACGT CCCAGGTGGG TGAGGGGATC GTGCAGGCGA TCACGAAGTC GGCCGGCTCG
GGTTCTTGA
|
|---|
| Protein sequence | MGADLRIGVL YGDGIGAEIV PCALAAVDAA AALEDVGIEW VELPMGSSAI SSHGSSLPAE
SLAVLDTLDA WILGPHDSAS YPPEHLRMPN PSALCRKRYG LYANLRPCRA YPGVPATTPG
IDVMIVRENS EGLYADRNMA VGSGEFMPTP DVALAVGVIT RQATERIARQ AFAIAEQRSR
RLTIVHKANV LQLTTGLFRD VCREVAAEYP DVVVDDKHVD AMAALLVRRP AEFDVLVTEN
LFGDILSDLA AELAGSLGLA GSVNCSATKV MAQATHGAAP DIAGRGVANP VSIVASAAMM
LRWWGNRDDD PRLAAVADRI ADAVAATLAS GLATADLGGS ASTSQVGEGI VQAITKSAGS
GS
|
|---|
| |