| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_2780 |
|---|
| Symbol | |
|---|
| ID | 8552144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 2968075 |
|---|
| End bp | 2969337 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
|---|
| Protein accession | YP_003273891 |
|---|
| Protein GI | 262202683 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.728201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAACG CCACCTTATG GCGAGCCCTG TTGGGGGTCG AGAAGACAGT CGTGGAGGAC
ATCGAGTTCG ACGAGGACGA GCAGACTCTG GTGGCCTGCG TTCGGCCCAC GCGACGTGCG
GGAGCTCGCT GCGGACGATG TCAGCGACGG TCTCCTTGGT ACGACCGTGG CGAGGGACGT
CGTCGGTGGC GGGCGCTGGA CCTGGGCACC ATCCAGGTCC ATCTCGAGGC CGACGCACCG
CGGGTCAACT GCCGCGAGCA CGGGCCCACG GTCCGCGCGG TGCCCTGGGC CCGGCATGGC
GCCGGACACA CCACCGGGTT CGATGAGCAG GTCGCCTGGC TGGCCACCCA GTGCTCCAAG
AGCGCGGTCA CCGAGTTGAT GCGGATCGCC TGGCGCACCG TGGGGGCGAT CATCACCCGG
GTCTGGGCCG ACGTCGAGAA GCTGCATGAC CGGTTCGCCG ACCTACGCCG GATCGGGATC
GATGAGATCT CCTACAAGCG CGGCCACCGC TACCTGACCG TGGTCGTCGA CCACGACACC
GGTCGGCTGG TCTGGGCCGC CCCCGGCCGG GACAAGGCCA CCCTCGAGGG CTTCTTCGAC
GCCCTCGGTG AGGAGCGGTG CAGCCAGATC ACCCACGTCT CCGCCGACGG TGCGGACTGG
ATCAGCACTG TGGTCGCCGA CCACTGCCCC CACGCGGTCC GCTGCGCCGA CCCCTTCCAC
GTCGTCCGGT GGGCCACCGA CGCCCTCGAC GAGGTCCGCC GAGCTGCCTG GAACCAGGCC
CGCGGAGCGG CCACCCAGCG CCGTGCCGGC CGCGCATCGG GACACGCGAA GGCGTTGAAG
CATGCCCGCT ACGCGCTGTG GAAGAACCCC GAGAACCTCA CGGTCAGGCA GCAGGCCAAG
CTGGCCTGGG TCGCCAAGAC CGACCCGCGG CTGCACCGTG CCTACCTGCT CAAAGAAGGC
CTGCGACTGG TCTTCCAGCT GCCCCACGCC GAGGCCGCGG AGGCGCTCGA GGTCTGGATC
CGGTGGGCGC GGCGCTGCCG GATTCCCGCC TTCGTGGAGC TGCAGCGTCG CATCGTCAAA
CACCAGGCCT CGATCCTCGC AGCGATCGAG CACGGTCTGT CCAACGGTCG CATCGAGTCG
GTCAACACCA AGATCCGGCT GATCACCCGC GTTGCCTTCG GATTCAGGTC TCCCGAGGCT
CTCATCGCCT TGGCCATGCT CAACCTCGGC GGCCACCGAC CAGTCCTCCC CGGCCGGTCA
TGA
|
|---|
| Protein sequence | MQNATLWRAL LGVEKTVVED IEFDEDEQTL VACVRPTRRA GARCGRCQRR SPWYDRGEGR
RRWRALDLGT IQVHLEADAP RVNCREHGPT VRAVPWARHG AGHTTGFDEQ VAWLATQCSK
SAVTELMRIA WRTVGAIITR VWADVEKLHD RFADLRRIGI DEISYKRGHR YLTVVVDHDT
GRLVWAAPGR DKATLEGFFD ALGEERCSQI THVSADGADW ISTVVADHCP HAVRCADPFH
VVRWATDALD EVRRAAWNQA RGAATQRRAG RASGHAKALK HARYALWKNP ENLTVRQQAK
LAWVAKTDPR LHRAYLLKEG LRLVFQLPHA EAAEALEVWI RWARRCRIPA FVELQRRIVK
HQASILAAIE HGLSNGRIES VNTKIRLITR VAFGFRSPEA LIALAMLNLG GHRPVLPGRS
|
|---|
| |