| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_2751 |
|---|
| Symbol | |
|---|
| ID | 8552115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 2934974 |
|---|
| End bp | 2936491 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003273862 |
|---|
| Protein GI | 262202654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.215764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAGTC CCCTGGGGAT CACCCCCGAT GAGTCCCTGC GCAAGGGACT GCAGAGTCGT
CACATCAGCA TGCTCGCGCT CGGCGGTGCC ATCGGTACCG GCCTGTTCGT GGCATCCGGC
GCCACTATCC ACGATGCCGG GCCGGGCGGC GCGGTCACCG CCTATCTGCT CATGGGCGTC
ATGGTCTTCT TCCTCATGCA GAGCCTGGGG GAGATGTCGG CCTACATCCC GTGCAGCAAT
CCCTTCGAGG AGTACGGCAA ACGGTTCGTC AGCAAGTCCT TCGGTTTCGC CGCCGGGTGG
AATTACTGGC TCAACTGGTC GGTGACCCTG GCCGCCGAAC TCGTGGCGGC CGGACTGATC
ATGAAGTTCT GGTTGCCCGA CGTGCCGTCG TGGATCTGGT CGGTGATCTT CCTGGCTGCC
CTGCTGGGGC TGAACCTGTT CGCGGTCAAG GCTTTCGGCG AGGCCGAGTT CTGGTTCGCG
ACCATCAAGG TGATCGCGGT CGTGGTCTTC CTCGGCGTGG GGGTGCTCCT GGTGCTCGGT
GTCGTCGGTG ACGGGCCGGC ACCCGGGTTC AGTAACTGGA CCATCGACGA CGCGCCGTTC
GTGGACTGGC CGCTGGGCAT GCTCTCGGTG TTCCTGATCG CCGGCTTCGC CTTCCAGGGC
ACCGAGATGA TCGCGGTGGC CGCCGGGGAA GCGGTGGAAC CCAAGAGTGC GATCCCGCGC
GCGGTGCGCA CGGTGTTCGT CCGGATTCTG CTCTTCTACG TCGGCACCCT GACGATCATC
TCGTTCCTGA TTCCCTACAC CGATCCGAAT CTGCTGAATG CCTCCGAGGA GAACATCGCG
ATCGCGCCGT TCACCCTGGT CTTCAAAGAC GCGGGCATCT CGGTGGCGGC GTCGATGATG
AACGCCGTGA TCCTCATCGC CATCCTGTCG GCGGGCAACG CGAGCCTGTT CGCGGCCACC
CGCGCGTTGT ACGGACTGGC GGTCGAGGGA AGTGCGCCGC GGGTGTTCAT GTGGGTCACT
CGACGCTCCG GCGTCCCGGT GATGGCGGTG GCGGCGACCA CCGCGATCGG GGCGCTGTGC
TTCCTCGCCA GCCGGGTGGG CGACGGCCGT GCCTACGTGT GGCTGGTGAC GGCGTCGTCG
GTGGCGGGCT TCATCACCTG GATCGGGATC GCCTGGGCGC ACTACCGATT CCGCCGGGCC
TGGAATCTGC AGGGCCGCTC ACTCGACGAG TTGCCCTATA AGGCGTGGCT GTATCCGGCG
GGCCCGATCG TGGCGTTGCT GATGTGCTTT GCGGTGATCG CGGGCCAGAA CTTCACCGCG
ATTCGCGACG GCACCGCGGG CAACTGGGAG TTGTGGCTCA CCGCCTACGG CGCGCTCGCC
GTGTTCCTCG GCTTCTGGTG GGGCCACAAA CTCCTCACCC GCATACCGTC GGTCGATCTG
CGCACCGCGG ATCTGTCGTC CACGGCGTCG GCCTCGGCAC ACCGGAATCC GGATCCGGAC
CCCGATCCGG TGCACTGA
|
|---|
| Protein sequence | MSSPLGITPD ESLRKGLQSR HISMLALGGA IGTGLFVASG ATIHDAGPGG AVTAYLLMGV
MVFFLMQSLG EMSAYIPCSN PFEEYGKRFV SKSFGFAAGW NYWLNWSVTL AAELVAAGLI
MKFWLPDVPS WIWSVIFLAA LLGLNLFAVK AFGEAEFWFA TIKVIAVVVF LGVGVLLVLG
VVGDGPAPGF SNWTIDDAPF VDWPLGMLSV FLIAGFAFQG TEMIAVAAGE AVEPKSAIPR
AVRTVFVRIL LFYVGTLTII SFLIPYTDPN LLNASEENIA IAPFTLVFKD AGISVAASMM
NAVILIAILS AGNASLFAAT RALYGLAVEG SAPRVFMWVT RRSGVPVMAV AATTAIGALC
FLASRVGDGR AYVWLVTASS VAGFITWIGI AWAHYRFRRA WNLQGRSLDE LPYKAWLYPA
GPIVALLMCF AVIAGQNFTA IRDGTAGNWE LWLTAYGALA VFLGFWWGHK LLTRIPSVDL
RTADLSSTAS ASAHRNPDPD PDPVH
|
|---|
| |