| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_2460 |
|---|
| Symbol | |
|---|
| ID | 8551824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 2630362 |
|---|
| End bp | 2632911 |
|---|
| Gene Length | 2550 bp |
|---|
| Protein Length | 849 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | alpha-glucan phosphorylase |
|---|
| Protein accession | YP_003273594 |
|---|
| Protein GI | 262202386 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.220527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCAT TCCGCCGGTT CAACGTTCGG GTCCCACTCC CCTCTCGGCT CACCGATCTG
GCAGTTCTCG CGAACAATCT CCGGTGGGTG TGGCATGTCC CCACCCAGGA ACTGTTCGCG
GCGATCGATC CGGAGCGCTG GGCGAGCACC GGCGACCCGC TGCGCGTCCT CGCCGACGTC
GATCAGGACC GGATGGACGC ACTCGCCGCC GACGAGGAGT TCGTCACCCG GGTGCGCGAT
CTGGCGGCCG AGCTGAAGGA TTACCTCGCC GCGCCGCAGT GGTTCGGGCG GTATGCAGAG
TCCACTGAAA CCGTTGCGCC ACAAGGCATC GCGTACTTCT CGATGGAGTT CGGCATCACC
GAGGTGCTGC CCATCTACTC CGGCGGACTC GGCATCCTCG CCGGTGATCA CCTCAAGGCC
GCCTCCGACC TCGGACTGCC GTTGATCGGC GTCGGCCTGT TCTACCGGTC GGGCTACTTC
CGGCAGAGCC TGTCGCACGA CGGGTGGCAG ATCGAGCGGT ACCCGGTGAA CGATCCCGGT
GCGCTGCCGC TGACGCTGCT GACCGACGAT TCCGGACCGG TGATCATCGG CATCGCCATG
CCGGGCGACC GTACGCTGCA CGCTCAGGTG TGGGTGGCCA GCGTCGGCCG CATCCCGTTG
CTGCTGCTCG ATTCCGACAT CGCGCTCAAT GACGAGGAAC TGCGTGCGGT CACCGACCGT
CTCTACGGCG GCGATCAGGA TCACCGCATC AAGCAGGAGA TCCTGCTCGG CATCGGCGGG
GTCCGCGCAC TGCGCGACTA CGTCCGCATC ACCGGCCGGG CCGAGCCGAG CGTGTTCCAC
ATGAACGAGG GGCACGCGGG ATTCCTGGGC GTGGAGCGCA TCCGCGAACT CGTCGACGGC
CCGGCCGCTC TCGACTTCGA CACCGCCGAG GCCGTGGTGC GCGCATCGAA CGTCTTCACC
ACCCACACCC CGGTTCCCGC CGGGATCGAC CGGTTCCCCA CCGATCTGGT GCGCTACTAC
CTCGATGCCG GGCCGGACGG CTCGTCGCGC CTGCTGCCCG GCCTGCACGC CGGCACGGTC
CTCGAACTCG GCGACGAAGC CGACCCGGGG GTGTTCAACA TGGCGCACAT GGGTTTTCGG
CTCGGACAAC GGAGCAACGG GGTGTCCCGG CTGCACGGCG AGGTCAGCCG GCAGATGTTC
GCCGACCTGT GGCCCGGCTT CGACGCCGAC GAGGTGCCCA TCGGCTCGAT CACCAACGGT
GTGCATGGAT TCACCTGGGT GGCCCGCCCA TGGCGCGACC TGGTCGGCGA GGACGAGGAC
TCCGCACCGG CGCACTACGC CGAGTTGCCC GACGGCGAAC TCTGGCGCAC CCGGCAGACG
TTGCGCGCCG GTCTGGTCGA CGAGGTACGC CGCCGCGCCC ATGCCAGCGG ACGCGACCGC
GGCTTCATCG ATGCCGAATT GGGCTGGACG GCAGAGATCT TCGATCCCGA GGCGCTCACC
ATCGGCTTCG CGCGCCGGGC CGCGACCTAC AAGCGGCTCA CACTGATGCT GCGCGACCCG
GACCGGTTGC GGCGCATCCT CACCGACGCC GAGCGGCCGG TGCAGCTCGT CATCGCCGGG
AAGGCTCATC CTGCCGACGA CGGCGGCAAG GCCCTCATCC AGCAGGTGGT GCGGTTCACC
GACGATCCCG AGTTGCGTCA CAAGATCGTC TTCCTGCCCG ACTACGACAT CTCGATGGCG
CGACACATCT ACGCGGGATG CGATGTGTGG CTGAACAATC CGGTGCGGCC GATGGAGGCC
TGCGGGACCT CGGGGATGAA GTCGGCGCTC AACGGCGGAC TCAACCTGTC CATCCTGGAC
GGCTGGTGGG ATGAGATGGC CGACGGGGAG AACGGCTGGG CGATCCCGTC GGCCGAGGGG
GTCGTCGACG AGCATCGACG CGACGATCTC GAGGCCGAGG CGCTCTACTC GCTACTCGAG
GAGTCGGTGA TCCCGTTGTT CTACACGCGC ACCCCCGACG GTGTGCCGCA GCGCTGGGTT
CAGATGGTGC GCCACACCCT GAGCCGGCTC GGGCCGAAGG TGCTCGCCTC ACGCATGGTG
CGCGACTACA CGGTCGAGCT GTACTGCCCG GCCGCGGCGG CCTTCGACGC CATCTGCGCC
GACGACTACG CGCAGGCCGG TGATCTCGCG TCCTATCGCG CCTTGATCGC GGCCGCGTGG
TCGTCGGTCA TGATCGCCGG GGTCGAGGAC GAGAAGGCCG ACGACGGTCT GCTGGTGACC
GCTCACGTCG CCCTGGGCGA CCTCGATCCC GACGCGGTGA AGGTGGAGGT GATCCTGGGA
CGGGTCACCG ACGACGGCGA CATCATCGAC CCGGTATCGG CGCGGATGGC ACCTGCCGAC
GGCACCGATG CGTCGGGCCG GACGGTGTAC GCGGCGACGA TCGGACCGCG CTCCTCGGGG
CTCCTCGGCT ACACCGTCCG CGTGCTGCCG AACCATCCGG CCCTGTCCGA CGACGCCGAA
CTCGGTCTGG TGCGCTACCC GGAGGTGTGA
|
|---|
| Protein sequence | MKAFRRFNVR VPLPSRLTDL AVLANNLRWV WHVPTQELFA AIDPERWAST GDPLRVLADV
DQDRMDALAA DEEFVTRVRD LAAELKDYLA APQWFGRYAE STETVAPQGI AYFSMEFGIT
EVLPIYSGGL GILAGDHLKA ASDLGLPLIG VGLFYRSGYF RQSLSHDGWQ IERYPVNDPG
ALPLTLLTDD SGPVIIGIAM PGDRTLHAQV WVASVGRIPL LLLDSDIALN DEELRAVTDR
LYGGDQDHRI KQEILLGIGG VRALRDYVRI TGRAEPSVFH MNEGHAGFLG VERIRELVDG
PAALDFDTAE AVVRASNVFT THTPVPAGID RFPTDLVRYY LDAGPDGSSR LLPGLHAGTV
LELGDEADPG VFNMAHMGFR LGQRSNGVSR LHGEVSRQMF ADLWPGFDAD EVPIGSITNG
VHGFTWVARP WRDLVGEDED SAPAHYAELP DGELWRTRQT LRAGLVDEVR RRAHASGRDR
GFIDAELGWT AEIFDPEALT IGFARRAATY KRLTLMLRDP DRLRRILTDA ERPVQLVIAG
KAHPADDGGK ALIQQVVRFT DDPELRHKIV FLPDYDISMA RHIYAGCDVW LNNPVRPMEA
CGTSGMKSAL NGGLNLSILD GWWDEMADGE NGWAIPSAEG VVDEHRRDDL EAEALYSLLE
ESVIPLFYTR TPDGVPQRWV QMVRHTLSRL GPKVLASRMV RDYTVELYCP AAAAFDAICA
DDYAQAGDLA SYRALIAAAW SSVMIAGVED EKADDGLLVT AHVALGDLDP DAVKVEVILG
RVTDDGDIID PVSARMAPAD GTDASGRTVY AATIGPRSSG LLGYTVRVLP NHPALSDDAE
LGLVRYPEV
|
|---|
| |