| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_2225 |
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| Symbol | |
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| ID | 8551584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gordonia bronchialis DSM 43247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013441 |
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| Strand | - |
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| Start bp | 2358213 |
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| End bp | 2362187 |
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| Gene Length | 3975 bp |
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| Protein Length | 1324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003273366 |
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| Protein GI | 262202158 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.58755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCG ACCGCACCGA TCCCGCCCAT CGCGATGATG CGGCCGAGCT CAGATCGTCG
ATGGCGACGC TGACGATCTC CGACGAGCAC CGTCTGCGCC GACGCCTCGA CAAGCTCGTC
GGCTCGGACA AACCCACCGC CTCGGCCGGC GAGTCCCCTG ACAGCGAACC CTGGCGGCGC
CTGCGAGCCG ATGTGGCCGC AGCACACCGC CGCGTGGCGA AGCGCACGGC ATCCGTCCCC
ACCCTCACCT TTCCACCGGA GCTGCCGGTC TCGGCGGCAC GCACCGAGAT CGCCGAGGCC
ATCCGGGACC ACCAGGTGGT GGTGATCGCG GGCGAGACCG GCTCGGGCAA GACCACCCAG
CTGCCCAAGA TCTGCCTGGG GCTCGGCCGT GGTGTCCGCG GAATGATCGG ACACACCCAG
CCACGTCGGA TCGCGGCGAG TTCCGTCGCG CGCCGCATCG CCGACGAGAC CGAGACGACA
CTCGGGGATG TCGTCGGATA TTCGGTGCGG TTCACCGACC GCTCAAGCGC CGACTCCCTG
ATCCGGGTGA TGACCGATGG CATCCTGCTC CGCGAGATCG GCACGGATCC GCTGCTGCGT
CGCTACGACA CCCTGATCAT CGACGAGGCC CACGAACGCA GTCTGAACAT CGACTTCATC
CTCGGCTATC TGCGCCGGCT GCTACCCCGT CGCCCCGACC TCAAGGTCAT CATCACCTCG
GCCACCATCG AACCCGAGCG GTTCGCCCGG CATTTCAGCA CACCGGCCGG CGAGGTCCCG
ATCCTCGAGG TCTCCGGACG CACCTATCCC GTCGACGTCC GGTACCGGGC CCTGACGTTG
CGTGAGAGCC CCGACCACGG CGACGACCTC GGCGGCGGCG AACACGCCGA TCTCGATCTG
TTCCAGGGCA TCGACGCCGC CATCGACGAG CTGTGGTCGA CCGGGCGCGG TGACGTCCTC
GTGTTCCTGC CCACCGAACG TGACATCCGC GACGCCGCGG ATACCTTGCG TCGCAGAGCA
TCCGCGGGTG CCGAGATCGT GCCGCTGTAC GCGCGGCTGT CGGTGGCCGA TCAGCAGCGC
GTGTTCGCGC CGTCGGACGG CCGGCGCATC GTCCTGGCCA CCAACGTCGC CGAGACCTCG
GTGACCGTGC CGGGAATCCG CTATGTCGTG GATTCCGGGA CCGCCCGCAT CAGCCGCTAC
TCGACCCGCA CCAAGGTCAA TCGCCTTCCG ATCGAACCGA TCTCACAGGC CAGCGCCCGC
CAGCGCGCCG GCCGCTGCGG CCGGGTGGCG CCGGGTATCT GCATCCGGCT CTACAGCGAA
GAGGACTTCG ACGCCCGCCC GGCCTTCACC GACCCGGAGA TCCTGCGCAC CAATCTGGCC
GCGGTGATCC TGCAGATGAC CTCGCTGCGC CTCGGCGACA TCGCCGACTT CCCCTTTGTC
GCCCCCCCCG ACCCGCGGGC GATCCGCGAC GGTATCGCCG TGCTGACCGA ACTCGGCGCC
ATCGAGATGC CGGATGGACA GAGCGGTCTG CCCCGGCTCA CCGCGGTCGG ACGCTCGATG
GCCCGCCTGC CCGTCGACCC GCGGATCGCC CGCATGCTCA TCGCGGGCCA CGAACTCGGC
TGTCTCGATC ATCTCGTCGT GCTCGCCGCG GCCCTCTCGC TGCCCGACGT CCGCGAACGC
CCATCCGACC ACCGTGAGGC GGCCGATGCC GCGCACCGGC GTTTCGCGGT ACCCAACTCG
GATTTCCTGT CCTACCTCGA ATTGTGGTCG TATCTCGAAG AGAAGCGAAC CGAATTGTCC
GGCAATCAGT TCCGCCGGAT GTGTGAACGT GAGTACCTGC ATTACCTGCG TATCCGGGAG
TGGCGCGACC TCACCCGGCA GCTGCGGGAG ATCGTCGGCA ACCTCGACTG GTCGACCGCG
CGCACCGAAC GCGACGCCGA CGCGATCCAC CGGGCCGTCC TCTCCGGCCT CCTGAGCAAC
ATCGCCGCCC GCAACGCCGA GGGACGCGAG TTCACCGGCG CGCGCAACAC CACCCTGATG
ATCTTTCCCG GCTCGGGGCT GGCCAAGAAG CCGCCATCGT TCCTCATGGC GGCCGAGATT
CTGGAGACCT CACGGCTTTT CGCGCACACC GTCGCCGGCA TCGATCCGCT GTGGGCCGAG
AAACTCGCCG GTCCGCTCGC CAAGCGCACC TACAGCGAGC CGCACTGGTC GGCGCGGCGC
GGCGCGGCGA TGGCCTACGA GCGGGTGACG CTCTACGGGG TGCCGTTGGT GGCCCGGCGT
CGTGTGGACT ACGGGCGCAT CGATCCGGAG ACGTCGCGAG AACTGTTCCT CCGGCATGCT
CTCGTCGAGG GCGACTGGCA CACCCAGCAC GCCTTCTTCG CCCGCAATCG CGCTCTGCTC
GAGGCGGCGG CCGACGTCGA ACACAAGGTT CGCCGAAAGG GTTTGGTGAT CACCGAGGAT
CAGCTCTTCG ACTTCTACGA TCAGCGGGTG GGTGCCGAGG TCACCTCGGC CCGCCACTTC
GACACCTGGT GGAAGAAGAC GCGGCGAACA CAGCCGGACC TGCTCGATCT GACCCCCGAC
GACGTGGTCA CCGACATCGC CGTCGCCGAC ACGGACTTCC CCGGCGCCTG GCAGCAGGGA
GACACCCGAT TCGAGTTGCG CTACCGGTTC GATCCCACCG CCGCCGACGA CGGGGTCACC
GTGGTCATCC CCGAACCGCT TCTCGCCCAT GTCCGTTCGG CCGGATTCGA CTGGTCGGTG
CCCGGCTTTC GGTCCGAGCT CGCCACCGCC CTGGTCAAGA CCCTGCCGAA ACACCTGCGC
AAGTCGATGT CACCCGCCCA ACGTTTCGCC GACCTCGCGC TGTCGCGGCT CACTCCCCGC
GCCGAACCGA TCATCACCGG CCTGTCCCGC GAACTGTCCG CGATCACCTC GATGACCGTG
TCGGCGGGCG ACTTCGACAC CGATCGCCTA CCGGCGCACC TTCGAGTGCA CTTCGCACTC
GCCGATGCCT CCGGAAGGAT CGTGGACACC GACGACTCCC TGGCCGATCT GCAACACCGA
CACTCGGATA CCGACTCCCA CCGAGCACCG CAGCGCCAGG TGTACACCGC CTGGACCTCG
GACGGCATCG GCACGCTCGG CGACCACACA CGGATGCGGG TCGCGGGCCA GCAACTCACC
CGCTATCCCG CACTCGAATC GGTGCTCGAT GCGCAGGGAC GTGCCCGGGG CGTCACCCGG
ACCGACGCGT CGAACCCCGA ATCGCGGGAC CGGCTGGTGG GCGGGGCCGT CACCACCCTG
CTCGAGATCG CGATACCGCC ACTGACGAAG AAGATCGTCG GCGGCCTCGA CGCCGGGGGG
CGACTCGCGT TGAGCCAGAG CCCATATCGG CACGGCGAGG ACCTGTTCGC CGACTGCACC
CGCCGCGCCA TCCGTGATCT CGCGGCGCAG CGTCCCGCCA TCGCCGCGAT CCGCACCCCG
GAGGATTTTC ACGCACTGCG TGACGAACTG CGTCCGCTGG TGTCCACCGC GGCCCCCGAG
TACTTCGCGC TGGCCGTCGA CGCCCTGCGT GCCGTTGCAC CATTACGCAC GCTCATCGAC
CGGCATGCCG GATCGGTGGC CGCCGACGAC GTCGCCGAGC AACTCGACCA TCTGATCTTC
GACGGCTTCG TCCGCGCCAC CCCGCGACGT CACCTCGCTG AACTCGGTCG CTATCTGCTG
GGTGCGCAGA CCCGGCTCGA GGGCCTGCCG GCATCTGCCG ACCGGGACCG GGCCGGCGTG
GCCATCATCG ATCGCGTGAC GCAGCGCTGG AATCAGCGCC TGGCCCAGGT TCCCGAGAAC
CGGCGCGACG CGGTCAACGA GGAAGCCCAA TGGCTCGTCG AGGAATTGCG GGTCGGTGTC
TTCGCCCAGC GGCTCGGCAC CGCATATCCG GTATCCGAGA AGCGCGCGCT ACGAACTCTG
GACCGACTCG GCTGA
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| Protein sequence | MSADRTDPAH RDDAAELRSS MATLTISDEH RLRRRLDKLV GSDKPTASAG ESPDSEPWRR
LRADVAAAHR RVAKRTASVP TLTFPPELPV SAARTEIAEA IRDHQVVVIA GETGSGKTTQ
LPKICLGLGR GVRGMIGHTQ PRRIAASSVA RRIADETETT LGDVVGYSVR FTDRSSADSL
IRVMTDGILL REIGTDPLLR RYDTLIIDEA HERSLNIDFI LGYLRRLLPR RPDLKVIITS
ATIEPERFAR HFSTPAGEVP ILEVSGRTYP VDVRYRALTL RESPDHGDDL GGGEHADLDL
FQGIDAAIDE LWSTGRGDVL VFLPTERDIR DAADTLRRRA SAGAEIVPLY ARLSVADQQR
VFAPSDGRRI VLATNVAETS VTVPGIRYVV DSGTARISRY STRTKVNRLP IEPISQASAR
QRAGRCGRVA PGICIRLYSE EDFDARPAFT DPEILRTNLA AVILQMTSLR LGDIADFPFV
APPDPRAIRD GIAVLTELGA IEMPDGQSGL PRLTAVGRSM ARLPVDPRIA RMLIAGHELG
CLDHLVVLAA ALSLPDVRER PSDHREAADA AHRRFAVPNS DFLSYLELWS YLEEKRTELS
GNQFRRMCER EYLHYLRIRE WRDLTRQLRE IVGNLDWSTA RTERDADAIH RAVLSGLLSN
IAARNAEGRE FTGARNTTLM IFPGSGLAKK PPSFLMAAEI LETSRLFAHT VAGIDPLWAE
KLAGPLAKRT YSEPHWSARR GAAMAYERVT LYGVPLVARR RVDYGRIDPE TSRELFLRHA
LVEGDWHTQH AFFARNRALL EAAADVEHKV RRKGLVITED QLFDFYDQRV GAEVTSARHF
DTWWKKTRRT QPDLLDLTPD DVVTDIAVAD TDFPGAWQQG DTRFELRYRF DPTAADDGVT
VVIPEPLLAH VRSAGFDWSV PGFRSELATA LVKTLPKHLR KSMSPAQRFA DLALSRLTPR
AEPIITGLSR ELSAITSMTV SAGDFDTDRL PAHLRVHFAL ADASGRIVDT DDSLADLQHR
HSDTDSHRAP QRQVYTAWTS DGIGTLGDHT RMRVAGQQLT RYPALESVLD AQGRARGVTR
TDASNPESRD RLVGGAVTTL LEIAIPPLTK KIVGGLDAGG RLALSQSPYR HGEDLFADCT
RRAIRDLAAQ RPAIAAIRTP EDFHALRDEL RPLVSTAAPE YFALAVDALR AVAPLRTLID
RHAGSVAADD VAEQLDHLIF DGFVRATPRR HLAELGRYLL GAQTRLEGLP ASADRDRAGV
AIIDRVTQRW NQRLAQVPEN RRDAVNEEAQ WLVEELRVGV FAQRLGTAYP VSEKRALRTL
DRLG
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