Gene Gbro_2217 details

Gene Information

• Locus tag: Gbro_2217
• ID: 8551576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: -
• Start bp: 2349868
• End bp: 2351967
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 69%
• Product: PTS system, fructose subfamily, IIC subunit
• Protein accession: YP_003273358
• Protein GI: 262202150

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00703787
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAC AGATCATCTC CGAGGCGACG GTGAGCCTCG ATGTCGACGC CGGCAACGAC 
CCGGCCGCCG TCATCACCTA CCTCGCCGAC TCCCTCGGCG CCGCCGGGCG CACCAGCGAC 
CCGGCCGAAC TCACCCGCGG CGCCCTCGAC CGGGAAGCCA AGTCGGCGAC CGGTCTGCCC 
GGCGGCATCG CCATCCCGCA CGCCCGCGCC GCCTCGGTCA CCGATGCCAG CCTCGCGATG 
GCCCGGTTGT CACAGAAGGT CGACTTCGGC GCCCCGGACG GTCCCGCCGA CCTGGTGTTC 
CTCATCGCCG CCCCCGAGGG CGGGGCGAGT GAGCACATGA AGCTGCTCAG TTCGCTGGCC 
CGCGCACTCG TGCGCCCGGA CTTCGTCTCC GCGCTGCGCG CCGCCCCCAG CGACGCCGCT 
GTCATCGAAC TGGTCAACGA GGCCATCGAT CCGCAGGCCA AGCCCGCCAC CTCCCCGGCC 
ACCACCGAGG CCGCGACCGC CGCCACCGCG ACGGCGACAA CGACGACCAA GGCGGCACCC 
GCCGGCGGTA CCCCCGGCGA GGGCGCCGCG ACCGGCGACC GGCCACGGAT CGTCGCGATC 
ACCGCCTGCC CCACCGGCAT CGCCCACACC TACATGGCGG CCGACGCACT CAAGTACGCC 
GCCGAACGGG CCGGTGTGGA GTTCGCGGTG GAGACCCAGG GGTCGTCGGC CACCACCCCG 
TTCACCCGGG ACACGATTGC CGACGCCGAC GCCGTCATCT TCGCCACCGA TGTCGGGGTG 
AAGGGCAAGG AACGCTTCCA CGGCAAGCCG GTGATCGCCT CCGGCGTCAA GCGTGCGATC 
AACGAACCCG ATGCGATGAT TGCCGAAGCC GTTGCCGCAG CCACGAATCC CCACGCGGCC 
GTGGTCACCG CCGGCGACGG CGACGGTGCG GCGAGCGACG CACCGGAAGG TGGCGTCGGA 
CTGGGCAAGC AGTTGCAGCA GGCATTGATG ACCGGTGTGA GCTACATGAT CCCGTTCGTC 
GCGGCGGGTG GTCTGCTGAT CGCGCTTGCG TTCCTGCCGT TCCTCGGCGG CTACGAGATC 
GCGAACAAGA CCCTCGATCC GGACAAAGCC CTCAACGACG GACAGTTCAT CGCCCTGCAC 
AACAGCCTGT GGGACCTGCC GGCCGGCGGT CTCGGCCAGT ACATCGGAGC GGTGCTCTTC 
GCGGTCGGAG GTCTGGCGAT GAGCATGCTC GTCCCGGCGC TGGCCGGCTA CATCTCGTTC 
GCGATCGCCG ACCGGCCCGG TATCGCCCCC GGTTTCGTCG CCGGACTCGT GTCGGTTCAG 
GTCGGGGCCA GCTTCATCGG CGGCCTGATC GGTGGTCTGA TCGCCGGCGT CGTCTGTCTG 
TGGATCTCCC GACTTCCGTT GCCCCAGTGG GCACGTGGCC TGATGCCGGT GGTCATCATC 
CCGCTTCTGG GCAGCCTGAT CATCGGTGTC GTGTTGTACA TGTTGCTCGG GAAGCCGCTG 
GCGTGGGTCA CCGAGAAGAT GACCGACGGC CTCAACAGCA TGTCCGGCGG CTCGGCGGTC 
ATCCTCGGCG TCGTCCTGGG ACTCATGATG TGCTTCGACC TCGGTGGACC GGTCAACAAG 
GCCGCGTATC TGTTCGCCAC CACCGGTCTG GCGGTCGGTT CGACCGCTCA GCTCGAGATC 
ATGGCCGCCG TGATGTGCGC GGGGATGGTC CCGCCCCTGG CGATGGCGCT GGCCACCGTG 
CTGCGTCCGG GCCTCTTCAC CGAGCCCGAG CGCGAGAACG GCAAGGCGGC ATGGCTGCTC 
GGCGCCTCGT TCATCTCCGA GGGCGCCATC CCGTTCGCCG CGGTCGATCC GCTGCGGGTC 
ATTCCCTCGA TGATGGCGGG CGGCGCGCTG TCGGGTGCCT TGATCATGGC CTTCGGAGTG 
ACCCAGCGAG CCCCGCACGG CGGCATCTTC GTGTTCTTCA CGATGAACAA CTGGCTGCTG 
TTCCTGGTGT CCCTGGTGGC CGGCACCGTG CTCTCGGCCG TCCTGGTGGT CGCCGCCAAG 
CAGTGGCATC GCAGCCGCGA CGCCCTCGAG GTGCCGGCCT ACGACGCCGT CGCGGCGTGA 

 

Protein sequence

MAEQIISEAT VSLDVDAGND PAAVITYLAD SLGAAGRTSD PAELTRGALD REAKSATGLP 
GGIAIPHARA ASVTDASLAM ARLSQKVDFG APDGPADLVF LIAAPEGGAS EHMKLLSSLA 
RALVRPDFVS ALRAAPSDAA VIELVNEAID PQAKPATSPA TTEAATAATA TATTTTKAAP 
AGGTPGEGAA TGDRPRIVAI TACPTGIAHT YMAADALKYA AERAGVEFAV ETQGSSATTP 
FTRDTIADAD AVIFATDVGV KGKERFHGKP VIASGVKRAI NEPDAMIAEA VAAATNPHAA 
VVTAGDGDGA ASDAPEGGVG LGKQLQQALM TGVSYMIPFV AAGGLLIALA FLPFLGGYEI 
ANKTLDPDKA LNDGQFIALH NSLWDLPAGG LGQYIGAVLF AVGGLAMSML VPALAGYISF 
AIADRPGIAP GFVAGLVSVQ VGASFIGGLI GGLIAGVVCL WISRLPLPQW ARGLMPVVII 
PLLGSLIIGV VLYMLLGKPL AWVTEKMTDG LNSMSGGSAV ILGVVLGLMM CFDLGGPVNK 
AAYLFATTGL AVGSTAQLEI MAAVMCAGMV PPLAMALATV LRPGLFTEPE RENGKAAWLL 
GASFISEGAI PFAAVDPLRV IPSMMAGGAL SGALIMAFGV TQRAPHGGIF VFFTMNNWLL 
FLVSLVAGTV LSAVLVVAAK QWHRSRDALE VPAYDAVAA