Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_1900 |
Symbol | |
ID | 8551250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 1993700 |
End bp | 1995121 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003273048 |
Protein GI | 262201840 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGCGC ATCCCGCCGG GCCCCGGCAC GCCGAACTCC TGGCTGCGCC GCATCTGGCG CAGCGGCCCA ATGACCCGTC GGTGCTCGCC GAGATCCCGG CGAATGTCTT CCCGCGCAAC GCAGCTCGCA ACGCTGACGG TGAACTGGAG ATCGCCGGTG TCGGGGTGTC CGAGCTCGCC GACAAGTACG GCACGCCGGT GTTCCTGGTC GACGAGGCCG ATTTCCGGTC ACGCTGCGCG GACATGATGT CGGCCTTCGG TCCGTACGGA CGAGTTCACT ACGCGTCCAA GGCCTTCCTG TGCACCGAGG TCGCGCGCTG GGTGAACGAG GAGGGACTGT CGCTCGACGT GTGCTCCGGC GGTGAACTCG CGATCGCGCT ACGTGCCGGC TTCCCGCCCG AGCGGATCGC GTTGCACGGC AACAACAAGA GCGTCGCCGA ACTCACCGCG GCCCTGGACG CCGGGGTCGG TCACGTGGTG CTGGACTCCT TTGTGGAGAT CGAACGACTC GATGCGCTGG CCGGCGAACG CGGTGTGGTC GCCGACGTGC TGGTCCGGGT CACCGTGGGA GTCGAGGCAC ACACACACGA ATTCATCTCG ACGGCGCACG AGGATCAGAA GTTCGGTTTC GCCCTGGCCG GCGGGGTCGC CATGGATGCG GTGCGCCGGG TGTTCGCCAC CGACAACCTG CGGTTGGTCG GGTTGCACAG TCACATCGGC TCGCAGATCT TCGACATGGA CGGCTTCGAA CTCGCCGCCC ACCGGGTGCT CGGTCTGCTA CACGACGTGG TTGCCGAGTT CGGTGTCGAC AAGACCGCAC AGATGTCGAT CGTGGATCTC GGTGGGGGAC TGGGCATCTC GTACCTGCCC GAGGAGCGTC CGCTGCCGGT CGGCACCGTC GCGGAAAAGC TGGCGGAGAT CGTTCGCCGC GAATCATCGG CCGTCGGACT GCCGATGCCC ACCATCGCGG TGGAACCGGG CCGCGCCATA GCCGGTCCCG GGACCGTGAC GCTGTATCGC GTCGGCACCA TCAAGGACGT CGCCCTCGGC GGCGGCTCTG TCCGTCGCTA CGTGTCGGTC GACGGCGGCA TGAGCGACAA CATCCGCACC GTCCTCTATC AGGCCGAATA CGACGTGCGC CTGGTGTCGC GGGTGTCCAC CGCGCGTGCC GTGGTCAGTC GCGTCGTCGG AAAGCACTGC GAGAGCGGCG ACATCGTGAT CAAGGACTGC TGGCTGCCCG AGGATCTGGA GCCCGGCGAT CTGATCGCGG TGGCGGCGAC CGGCGCGTAC TGCTATTCGA TGTCGAGTCG CTACAACATG GCGATGCGCC CGCCGGTGGT CGCGATCGCC GACGGAGCAG ACCGAATGCT GTTGCGCCGC GAGAACATCG ACGATTTCTT CAGCCTGGAG GTGACCCAGT GA
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Protein sequence | MNAHPAGPRH AELLAAPHLA QRPNDPSVLA EIPANVFPRN AARNADGELE IAGVGVSELA DKYGTPVFLV DEADFRSRCA DMMSAFGPYG RVHYASKAFL CTEVARWVNE EGLSLDVCSG GELAIALRAG FPPERIALHG NNKSVAELTA ALDAGVGHVV LDSFVEIERL DALAGERGVV ADVLVRVTVG VEAHTHEFIS TAHEDQKFGF ALAGGVAMDA VRRVFATDNL RLVGLHSHIG SQIFDMDGFE LAAHRVLGLL HDVVAEFGVD KTAQMSIVDL GGGLGISYLP EERPLPVGTV AEKLAEIVRR ESSAVGLPMP TIAVEPGRAI AGPGTVTLYR VGTIKDVALG GGSVRRYVSV DGGMSDNIRT VLYQAEYDVR LVSRVSTARA VVSRVVGKHC ESGDIVIKDC WLPEDLEPGD LIAVAATGAY CYSMSSRYNM AMRPPVVAIA DGADRMLLRR ENIDDFFSLE VTQ
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