| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1859 |
|---|
| Symbol | |
|---|
| ID | 8551208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 1943251 |
|---|
| End bp | 1944885 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_003273008 |
|---|
| Protein GI | 262201800 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.308507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGTG GCGGGGACGT GAACGACGGC GGTGCGAACG ACAGCGACGG TGCCGACACC
AGGGGCGCTG ACAACAAGGG CGCTGACAAC AGGGACGCTG ACAACAGGGA CCCGAACAGC
GGTAACGCTC GGGAGGCGAT TTTCTCCCCA TTCGCGCGCC CGGAGAACCC GGGCGCCGGG
GCAACGGTCG TCGGCGATCC CGCCGCCACG TCGCGTCGCA GCCTGCATGT GCCGGTCTCG
CCGGGAACCG CTCAGGTCTT CGGTCGGCCC GACGGTGCGC ACGGATCGTT CGCGACCTCG
CCGTCGACGC AAACTCCCCA ACCGCACATC GCTCCGCCCG ACCCGGTGCT CGCGGAGGCG
TTCGGCCGGC CCGCGGGTTC CGACGAGACC CTGCAGCGCG ACCCGCTCGC GACCTATGGC
GAAGCCGACG ACGAGCCGGC GCCGGCCGAC CCGTGGCGCG ACCCGGAGAG CCCGGCGCAT
CTCGACACCC CCGCGGTCGC CGTCGCCACG CCCGCCCCAC CGAGCGCTCC CGGTCCCAAA
CTGGGAGTGC GCGACATCCT CTTCGGCAAC CGCGTCAGTT GGGTGGCCCT CGTGGTGCTC
GCGGTCATCG CGCTGCTCAT CGGCATTCTC GGCGGGCTGA TGGGCCGGAT GACCGCCGGC
ACTTCGGCGC CCCTGCACAG CAACACCGTC GAACTGTCCA CCGACGACTC CACCGGTAAC
GGCGACCCGC GTTCGCCCGT CGCCCGCGTG GTGCAGGCGG TGGAACGCTC AGTGGTGGAG
ATCGACGTCC GTACCGCGAG CGCGTCGGGG ACGGGGTCGG GTTTCGTGAT CAGTCCCCAG
GGCTACATCC TCACGAACAA TCACGTGATC TCGATGGCCG CGACCGAACG CAGCGCCAGG
CTGGAGGTCG TCTTCTTCGA TCGCCAGCGT GTGCCCGCAC GGGTCGTCGG GCGCGACCCC
AAGACCGACC TCGCGGTGAT CAAGGTCGAC AACGTCGCCA ACCTGGTGGT CGCGAAGCTG
GGTAACTCCG GTGACCTGCA GATCGGTGAA GAGGTCGTCG CCTTCGGTTC GCCACTCGGC
CTCAACCGAA CCGTGACCAG CGGAATCGTC AGCGCGCTCA ACCGTGCCGT GGCGTTGGCG
CCGGATGCGG AATCCGACAC CGACGCGGTC ATCGACGCCA TCCAGACCGA CGCGGCGATC
AACCCCGGCA ACTCGGGCGG CCCGCTGGTG AACGATCGCG CGCAGGTCGT CGGCATCAAC
ACCGCCATCC GCAGCGGTGG TGGCGGCTCG ATCGGACTGG GCTTCGCGAT CCCGATCAGC
CAGGCCGAAC CAATCGCGCA GACCCTCATC CGTGACGGTG CGGTCAAGCA CCCACAGATC
GGGGTCAACG TCAGCTCGGT CCGCAACGAA CGCGTTCTCG GGGCCCAGGT CCGCAACGTG
GTCAGCGGTG GTCCCGCCGA TCGTGCCGGA CTGCGCGAGA ACGACGTGAT CGTGCAGTTC
AACGGCCGGC CGGTGGAAAG CGCCGACGAG TTGAATGTCG CGGTGCGTAC CGCGAAGATC
GGCGAGTCAG TACCATTCAA GTACTCCCGG GACAATCGGG TGTTCACCGG CACCATCACG
CCCGTCAGTG ACTGA
|
|---|
| Protein sequence | MNGGGDVNDG GANDSDGADT RGADNKGADN RDADNRDPNS GNAREAIFSP FARPENPGAG
ATVVGDPAAT SRRSLHVPVS PGTAQVFGRP DGAHGSFATS PSTQTPQPHI APPDPVLAEA
FGRPAGSDET LQRDPLATYG EADDEPAPAD PWRDPESPAH LDTPAVAVAT PAPPSAPGPK
LGVRDILFGN RVSWVALVVL AVIALLIGIL GGLMGRMTAG TSAPLHSNTV ELSTDDSTGN
GDPRSPVARV VQAVERSVVE IDVRTASASG TGSGFVISPQ GYILTNNHVI SMAATERSAR
LEVVFFDRQR VPARVVGRDP KTDLAVIKVD NVANLVVAKL GNSGDLQIGE EVVAFGSPLG
LNRTVTSGIV SALNRAVALA PDAESDTDAV IDAIQTDAAI NPGNSGGPLV NDRAQVVGIN
TAIRSGGGGS IGLGFAIPIS QAEPIAQTLI RDGAVKHPQI GVNVSSVRNE RVLGAQVRNV
VSGGPADRAG LRENDVIVQF NGRPVESADE LNVAVRTAKI GESVPFKYSR DNRVFTGTIT
PVSD
|
|---|
| |