Gene Gbro_1802 details

Gene Information

• Locus tag: Gbro_1802
• ID: 8551151
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: -
• Start bp: 1878441
• End bp: 1883075
• Gene Length: 4635 bp
• Protein Length: 1544 aa
• Translation table: 11
• GC content: 71%
• Product: DEAD/H associated domain protein
• Protein accession: YP_003272953
• Protein GI: 262201745

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0257988
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCGAA CCGCGCCGGT ACTCCAACGA TTCACCGCTC CCACCCGGCG GTGGTTCACC 
GGTGCGTTCA CGGCGCCCAC CCCTGCCCAG GTCGGCGCGT GGAACTCCAT CGCCGATGGG 
GAGAACACGC TGGTCATTGC GCCCACCGGC TCGGGAAAGA CGTTGTCGGC GTTCCTGTGG 
GCGCTCGACC GGCTGGCGGC CACCCCGGAC CGGGCGGCCG GCACCCGCGT CCTCTACATC 
TCCCCGCTGA AGGCGCTGGC GGTCGATGTC GAGCGCAACC TCCGCGCGCC GCTGACCGGC 
ATCACCCGGG CCGCGCAGGA ACTCGGCGAG CCCGAACCGA ACATCACCGT CGGCCTGCGC 
TCCGGGGATA CCGCGGCGGC AGCACGCCGA CTCCTCGCCA AGGCACCACC GGACATCCTG 
ATCACCACCC CCGAGTCGCT CTACCTGATG CTCACCTCGT CGGTCCGTGA AACCCTGCGC 
ACCGTCGACG CGGTCATCGT CGACGAGGTG CACGCGGTGG CCGGCACCAA ACGCGGCACT 
CACCTGGCGC TGTCGCTGGA ACGCCTCGAC GACCTGCTGG AGACCCCGGC GCAGCGCATC 
GGACTCTCGG CGACCGTGCG GCCCCCGGAG GTGGTGGCCG ACTTCCTCGC CGGCTCCCGT 
CCGTGCCGCG TCGTCCGCCC GCCCGCAGCC AAGACCTTTG ACCTGCGGGT CGATGTTCCC 
GTACCGGACA TGGCCAATAT CCCGCCACCG GCCGAGGACA CGGCCGACGA CCTCGATGAC 
GCGTTCTCGC CGACCGCCGG CTCGCTGTGG CCGCACGTCG AGGCCTCCAT CGTCGACGCG 
ATCGAGGCCA ACCGCGCGAC CATCGTCTTC GCCAATTCCC GTCGCCTCGC CGAGCGGCTG 
ACCGCCCGGC TGAACGAGAT CTACGCGCAG CGCTCCGGTG TGCCGGTGCA GGCAGCGGCC 
AATCCGGGGG TCCCCGGGGG CGCACCCGCG CACATCATGG CCAGCGGCGC CGCGGGTGGC 
GCGCCGACGA CCCTCGCACG CGCCCATCAC GGCTCGGTGA GCAAGGAGCA GCGCGCCGAG 
ATCGAGGACG ACCTCAAATC CGGCCGATTG CGCTGCGTAG TCGCCACCAG CTCACTGGAA 
CTCGGAATCG ACATGGGCGC AGTGGATCTC GTGATCCAGG TGGAGGCACC GCCGTCGGTG 
GCCAGTGGAT TGCAGCGCAT CGGCCGCGCC GGGCATCAGG TGGGTGAGAT CAGCCAGGGT 
GTGCTCTACC CCAAACACCG CACCGATCTG GTGCACTGCA CGGTCGCGGT CGAACGGATG 
CGCGCCGGCG CCATCGAGGA GCTCCGCATC CCCAAGAATC CGTTGGATGT GTTGGCGCAG 
CACACGATTG CCGCCGCGGC CATGGACGAC CTCGACGTCG ACCAGTGGTT CGACGTGATC 
CGCCGCGCCG CGCCGTACCG GGAGCTGGCC CGCGAGGTGT ACGTATCGAC CCTGGACCTG 
ATCTCCGGGC GATTTCCGTC CGATGAGTTC GCCGAACTCC GTCCCCGGGT GACCTGGGAT 
CGCGACGCCA ACACACTCGT CGGGCGCCGC GGGGCCCAGC GTCTGGCCGT CACCTCCGGT 
GGAACCATCC CGGATCGCGG GCTGTTCGGC GTGTTCATGG TGGGCGAGAA GTCCGCTCGG 
GTCGGTGAGC TCGACGAGGA GATGGTCTAC GAGTCCCGCG TCGGCGACGT CTTCGCGCTC 
GGCGCCACGA GTTGGCGCAT CGAGGACATC ACCCACGACC GAGTGCTGGT GACCCCCGCC 
TTCGGGCAGC CGGGCCGGCT TCCGTTCTGG GTGGGCGACG CCGTCGGGCG TCCGGCCGAG 
TTGGGTGCCG CCATCGGCAA GTTCACCGGC GCGATCGCCG ATCCGCAGGA ACTGGACCGG 
CAGGCAACCG AACTCGGCCT CACCGAGTAC GCCCGCGACA ACCTCGCCGC GCTGATCGCC 
GAGCAGCGCG AGGCCACCGG TCATCTCCCC ACCGACCGGA CCCTGGTGAT CGAACGCTTC 
CGCGACGAGC TCGGCGACTG GCGGGTGATC CTGCACTCCC CCTACGGTTT ACGCGTGCAC 
GCCCCGTGGG CGAGTGCGAT CTCGGCGCGC CTGCAGGAGA CTCTCGGGCT GGCGGGCGCC 
ACCACCGCAT CCGACGACGG CATCATCGTG CGCCTGCCCG ACACCGAAGA TGAGCCGCCC 
GGTGCCGCGG TGTTCGTGAT CGACCCCGAC GACATCGAGC AGATGGTGAC CGACGCGCTA 
GCCGAGTCGT CGATGTTCGC GTCCCGTTTT CGGGAATGCG CGGCTCGCGC CCTGCTGCTG 
CCGCGACGCG ACCCGGGCCG CCGCGCCCCG CTGTGGCAAC AACGGCAGCG CAGTGCCCAA 
CTCCTCTCCG TCGCATCACA ATTCCCCGAC TTCCCGATCG TGCTCGAAGC CGTCCGCGAA 
TGCCTGCAGG ATGTCTACGA TCTGCCCGCG CTGACCGACC TGCTGCGCCG GATCTCCACC 
CGCCGGGTGC GTCTGGTCGA GACGGAGACC CCCGAACCGT CGCCGTTCGC GGCGTCGTTG 
CTGTTCGGGT ATGTCGGCGC GTTCATGTAC TCCGACGACG CGCCACTGGC CGAACGTCGG 
GCCGCCGCAC TGTCTCTCGA CACCAGCCTG CTGGCCCAGC TGCTCGGTCG CGTCGATCTG 
CGCGAGCTCC TCGATCCCGG GGTAATCGCT GCGGTCATCG CGCGGTTGCA GCGACTCGAT 
CCATCTCGCC AGGCCCGCGA CGCCGAGGAC ATCGTCGACC TGCTGCGCTG GCTCGGTCCG 
CTCACCACCG AGGAGGTGGC CGCCCGGTAC CAGGGCGACG ATGCCGCCGC CGTGCTGGCC 
GATCTGCATC GCGCCGGTCC GATCATCTCG GTCACTCATC AGGGCCGTCC CCTGTGGGCC 
GCCGTCGAGG ACACCGCACG ACTACGTGAC GCGCTCGGTG TCCCGGCTCC GCTGGGTGTC 
CCGGCCGCCT ACACCGACCC GGTGCCCGAT CCCGTGACCG ATCTGGTGCA CCGGTACGCG 
CGCACTCACG GTCCCTTCAC CCTGACCGAG GCCGCCGAGT CGCTGGGGAT GGCGGTGGCC 
GTCGTCCGCG ACACACTGGT GCGCCTGGCC GCCCAGCGCA AGGTGGTCGA AGGCGATTTC 
CTGCCCGCGG CCGCCGACGA CGCACACCCG ACCACGCAGT GGTGCCATGC CGATGTCCTG 
GGACAGATCC GGCGCGGTTC GCTGGCGGCC AGTCGCGCCG ACGTCGCGCC CGTCGACGCC 
GCCACCCTGG GCCGTTTCCT CGGCGGCTGG CATCACGTCA CACCCGCCGA GCGACTGAGC 
GGCGTCGACG GGGTCGCCAC GGTGCTCGAC CAGCTCGCCG GCTATCCGCT GCCGGCGTCG 
GCGTGGGAGT CACTGATCCT GCCGGCCCGC GTCGCCGACT ACTCCCCCGC CATGCTCGAT 
GAACTGCTCT CCTCGGGCGA GGTGGTGTGG TCGGGTCACG GCCGGATCGG CGGTGCCGAC 
GGTCAGATCG CGTTCCATCC TGCCGATCTG CTCCCGGTCA CTCTCGAACC GCCCGACGAG 
ATCGACCTGA CCGCCATCCA CGCCGCGCTG CTGGCGGTGC TCACCCCGGG TGGCGCGTTG 
CGTTTCGCCC AGCTCACCGA TGCGGCCTCG GAAACCCTGT CGGCGGCCGG CGCAGCGGTG 
CCATCGACAG CCGACATCGA GTCGGCCCTG TGGGATCTGG TGTGGGCCGG GCAGGTCGCC 
AACGACTCCT TCGCCGCGGT ACGTGCGCTG CTGCGGCCCG ATCGTCGATC GGTGGGACGC 
GGCGCCGGTT CCCGTCCGAC GCCTGCCCAC CGCGGTCGCG CACGCGCCCC TCGCATTCGG 
CCGCAACGTC TTTCGACACG TTTTCTCAGC GAGCACGCGA CCGGCCGGCC GTCGTCACCG 
ACGACGACCG GTCGCTGGTT CCTGCTGGCC CGCGATGATC TCGATCCGAC CGCCGCCACC 
CAGGCGCTGT GCGAACAACT TCTGGTCCGC TACGGAGTGG TGACGCGGGG TTCGGTGGCC 
ACCGAGGGTG TACCCGGTGG GTTCGCGCGG GTCTACAAGG CGCTCAGCGT CTTCGAGGAC 
AGCGGCGTGG TCCGTCGTGG CTACTACGTC GACGGGCTCG GGGGCGCCCA GTTCGCCCGG 
CCGACCACCG TCGACGAGTT ACGCCGCCAT GCCGTCGACG CGGACAGCGC TGCCCCGGCT 
GTTGTGCTGG CGGCCACCGA CCCGGCCAAT CCCTATGGCG CAGTTCTCGA TTGGCCCGAG 
ACAAGCGCTG AGGACTCCGG GCACCGCCCG GGCCGCAAAG CGGGTGCCCT CGTCGTGTTG 
CTCGCCGGCG AGCCGGTGCT GTTCGTCGAA CGTGGGGGTA AGACGGTTCT CACCTTCAGC 
TCGGACGCCG ATCGGTTACG CACCGCCGCA GGCGCTCTCG CCGACGCCGT GCGCGCCGGG 
CGGCTGTCCC GGCTGACGAT CGATCAGGTG GATTCGCGGC CGGTGCTCGG CTCCGAGATG 
GCACCGGTGC TCGTCGACGC GGGGTTCGCC ACCACCCCGC GCGGTGTGCG CCTGCGGTAC 
GGCCTCCATG CCTGA 

 

Protein sequence

MARTAPVLQR FTAPTRRWFT GAFTAPTPAQ VGAWNSIADG ENTLVIAPTG SGKTLSAFLW 
ALDRLAATPD RAAGTRVLYI SPLKALAVDV ERNLRAPLTG ITRAAQELGE PEPNITVGLR 
SGDTAAAARR LLAKAPPDIL ITTPESLYLM LTSSVRETLR TVDAVIVDEV HAVAGTKRGT 
HLALSLERLD DLLETPAQRI GLSATVRPPE VVADFLAGSR PCRVVRPPAA KTFDLRVDVP 
VPDMANIPPP AEDTADDLDD AFSPTAGSLW PHVEASIVDA IEANRATIVF ANSRRLAERL 
TARLNEIYAQ RSGVPVQAAA NPGVPGGAPA HIMASGAAGG APTTLARAHH GSVSKEQRAE 
IEDDLKSGRL RCVVATSSLE LGIDMGAVDL VIQVEAPPSV ASGLQRIGRA GHQVGEISQG 
VLYPKHRTDL VHCTVAVERM RAGAIEELRI PKNPLDVLAQ HTIAAAAMDD LDVDQWFDVI 
RRAAPYRELA REVYVSTLDL ISGRFPSDEF AELRPRVTWD RDANTLVGRR GAQRLAVTSG 
GTIPDRGLFG VFMVGEKSAR VGELDEEMVY ESRVGDVFAL GATSWRIEDI THDRVLVTPA 
FGQPGRLPFW VGDAVGRPAE LGAAIGKFTG AIADPQELDR QATELGLTEY ARDNLAALIA 
EQREATGHLP TDRTLVIERF RDELGDWRVI LHSPYGLRVH APWASAISAR LQETLGLAGA 
TTASDDGIIV RLPDTEDEPP GAAVFVIDPD DIEQMVTDAL AESSMFASRF RECAARALLL 
PRRDPGRRAP LWQQRQRSAQ LLSVASQFPD FPIVLEAVRE CLQDVYDLPA LTDLLRRIST 
RRVRLVETET PEPSPFAASL LFGYVGAFMY SDDAPLAERR AAALSLDTSL LAQLLGRVDL 
RELLDPGVIA AVIARLQRLD PSRQARDAED IVDLLRWLGP LTTEEVAARY QGDDAAAVLA 
DLHRAGPIIS VTHQGRPLWA AVEDTARLRD ALGVPAPLGV PAAYTDPVPD PVTDLVHRYA 
RTHGPFTLTE AAESLGMAVA VVRDTLVRLA AQRKVVEGDF LPAAADDAHP TTQWCHADVL 
GQIRRGSLAA SRADVAPVDA ATLGRFLGGW HHVTPAERLS GVDGVATVLD QLAGYPLPAS 
AWESLILPAR VADYSPAMLD ELLSSGEVVW SGHGRIGGAD GQIAFHPADL LPVTLEPPDE 
IDLTAIHAAL LAVLTPGGAL RFAQLTDAAS ETLSAAGAAV PSTADIESAL WDLVWAGQVA 
NDSFAAVRAL LRPDRRSVGR GAGSRPTPAH RGRARAPRIR PQRLSTRFLS EHATGRPSSP 
TTTGRWFLLA RDDLDPTAAT QALCEQLLVR YGVVTRGSVA TEGVPGGFAR VYKALSVFED 
SGVVRRGYYV DGLGGAQFAR PTTVDELRRH AVDADSAAPA VVLAATDPAN PYGAVLDWPE 
TSAEDSGHRP GRKAGALVVL LAGEPVLFVE RGGKTVLTFS SDADRLRTAA GALADAVRAG 
RLSRLTIDQV DSRPVLGSEM APVLVDAGFA TTPRGVRLRY GLHA