Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_1797 |
Symbol | |
ID | 8551146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 1871485 |
End bp | 1872999 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | transposase IS4 family protein |
Protein accession | YP_003272948 |
Protein GI | 262201740 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.13615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGTTCG TGCGGACGGT GAAGACGAAG TCGGGGGCAA CGGCTGTCCA GATTGTGTAC TCGAATCGTG GTGGGGCGCG CAGGATCGAG CACATCGGAT CTGGTCATGA CGAACAGGAG GTCGCCGCGT TGAAAGCGGC GGCTGCTGCG CGGCTGTCGC AGGGGCAGCA GCAACTGGAC CTGGGGATCG CCGCCGTCGA TGGGGCTGGG CCACTACCGA TCACCAGTTC GCGGATGGCG GTGCTGGTCG ATGCGTTGCT GAGAATCTAT GACGAACTCG GATTCACCGA GAAGACGTAC GGCGACAACG TGTTTCGTGA TCTCGTACTG GCCAGGATCA TCGAGCCGAC GAGCAAACTC GATTCGCTGC GGGTCCTGGA TGAAGCGGGA GTGAATGCAC CGTCGTATGC GACGGTCACC CGCCACCTGC GCATGTTTGC CGAGCCGCGG TGGCAGCGTG AGCTGTCGCG GGCGTGCGCC GAGCACGCCC GCCTCGGGCC GGCGACGCTG TGTTTGTATG ACGTGACGAC CCTGTACTTC GAGACCGACA AGGCCGACGG GTTTCGCGAA CCGGGGTTCT CCAAGGAACG GCGCCTGGAA CCGCAGATCA CGGTCGGGTT GTTGACCGAC GTGTCGGGGT TTCCGTTGAT GATGGAAGCG TTCGAAGGAA ACCGGGCCGA GACATTGACG ATGATGCCGA CGCTGACCGC CTTCATGACC GCCCACAAGC TCACCGATGT GACCGTGGTG GCCGATGCCG GCATGATCTC GACGGACAAT ATGAAAGCCA TCGAGGATGC CGATCTGACG TTCATTCTGG GGGAGAAGAT CCCGACGGTC CCCTATCTGA TCAGCAAGTG GCACAAAGAC AATCCCGGAT CGACACCGCC GGACGGGTTG ACCTTGACCC AACGCAAACC GGCGAACTCG AAGACCAGCT ACCGCAGGGA CCGGGTGGTG TACTACCGCT ACAGTGCTGA TCGTGCCCGA CGCAGCCTGC GGGGCATCAC CGAGCAGTTG GAGAGGGCGG AAAAGGCTGT GGCAGGCAAG ATCCCGGTCA AACGTAACCG GTTCGTCACC CTGACCGGCG CGGACAAGAG TGTCAACACT GCGTTGGCTA AGAAGGCCAA GACCCTCGCG GGATGGAAGG CGTATGCGAC GAACATCGAC TCTCCAACAC CGGATTTCGT GATCGGCTCG TACCACCAGC TGTGGCGCAT CGAGAAGAGC TTCCGCATGT CGAAATCTGA TCTGGCCGCC CGCCCGATCT TCCACCACCT CGAGGGATCG ATCCGGGCGC ACCTGACGAT CGTGTTCGCC GCACTCGCGA TCACCCGGAT CGTCGAAGCC CGCACCGGAT GGTCGATCAA GAAGTTCGTC ACCACCGCAC GCCGCTACCG CACCATCGAG ATCCAAGCCG CCGGTCAGAC CGTCACCGCC GCAGATCCGC TCCCCGACGA CCTGGCTCAG GCTCTGCGCG ACCTCGCCCC AGACGTGGAC ACTAATTTGA GCTAA
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Protein sequence | MAFVRTVKTK SGATAVQIVY SNRGGARRIE HIGSGHDEQE VAALKAAAAA RLSQGQQQLD LGIAAVDGAG PLPITSSRMA VLVDALLRIY DELGFTEKTY GDNVFRDLVL ARIIEPTSKL DSLRVLDEAG VNAPSYATVT RHLRMFAEPR WQRELSRACA EHARLGPATL CLYDVTTLYF ETDKADGFRE PGFSKERRLE PQITVGLLTD VSGFPLMMEA FEGNRAETLT MMPTLTAFMT AHKLTDVTVV ADAGMISTDN MKAIEDADLT FILGEKIPTV PYLISKWHKD NPGSTPPDGL TLTQRKPANS KTSYRRDRVV YYRYSADRAR RSLRGITEQL ERAEKAVAGK IPVKRNRFVT LTGADKSVNT ALAKKAKTLA GWKAYATNID SPTPDFVIGS YHQLWRIEKS FRMSKSDLAA RPIFHHLEGS IRAHLTIVFA ALAITRIVEA RTGWSIKKFV TTARRYRTIE IQAAGQTVTA ADPLPDDLAQ ALRDLAPDVD TNLS
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