| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1680 |
|---|
| Symbol | |
|---|
| ID | 8551029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 1751729 |
|---|
| End bp | 1752682 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hydroxymethylbutenyl pyrophosphate reductase |
|---|
| Protein accession | YP_003272843 |
|---|
| Protein GI | 262201635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAT CCAAGCGCGT CCTGCTCGCC GAACCGCGGG GCTACTGCGC CGGGGTCGAC
CGGGCGGTGG AGACCGTGGA GCGGGCACTC GACAAGCACG GCGCACCGGT GTACGTCCGC
AAGGAGATCG TGCACAACCG CCACGTGGTG GAGACCCTGA GCGATCGCGG GGCCGTGTTC
GTCGGCGAGA CCGACGAGGT CCCCGAGGGC GCCATCGTCG TGTTCTCCGC GCACGGGGTG
TCCCCGGAGG TGCACCGGAC CGCCGCCGCC CGCAGCCTCA AGACCATCGA CGCGACGTGC
CCGCTGGTCA CCAAGGTGCA CCAAGAGGCC AAGCGCTTCG CCCGCGACGA CTACGACATC
CTGCTCATCG GCCACGAAGG CCATGAAGAG GTGGAAGGCA CCGCCGGTGA GGCGCCCGAG
CACATCCAGC TCGTCGACGG CCCGGACAGT GTCGACAAGG TGTCGGTGCG TGACGAATCC
AAGGTGATCT GGCTGTCCCA GACGACGTTG TCGGTCGACG AGACGATGGA AACCGTGAAG
CGACTGCGCG AGAAGTTCCC CCAGCTCGCC GACCCGCCCA GCGACGACAT CTGCTACGCC
ACCCAGAACC GTCAGGTCGC CGTGAAGGCG ATGGCCCCGC ACTGCGACCT CGTGATCGTC
GTCGGGTCAA CGAACTCGTC CAACTCGGTG CGCCTCGTGG AGGTCGCCGT GCAGAACGGC
GCGAGCGCCG GTCACCTGGT CGACTACGCC CGCGAGATCG ACCCGGCGTG GTTGGAAGGC
GTGAACACCG TCGGCGTCAC CTCCGGTGCC TCGGTACCCG AGGTCCTGGT CCGCGGCGTC
CTGGACTACC TCGCCGAGCG CGGCTACGAC TCGGTGGAGA CGGTCAACAC CGCCGAAGAG
ACCCTCACCT TCGCGTTGCC GCGCGAGCTG CGGCCGGCGC GGACCGCGCG CTGA
|
|---|
| Protein sequence | MSESKRVLLA EPRGYCAGVD RAVETVERAL DKHGAPVYVR KEIVHNRHVV ETLSDRGAVF
VGETDEVPEG AIVVFSAHGV SPEVHRTAAA RSLKTIDATC PLVTKVHQEA KRFARDDYDI
LLIGHEGHEE VEGTAGEAPE HIQLVDGPDS VDKVSVRDES KVIWLSQTTL SVDETMETVK
RLREKFPQLA DPPSDDICYA TQNRQVAVKA MAPHCDLVIV VGSTNSSNSV RLVEVAVQNG
ASAGHLVDYA REIDPAWLEG VNTVGVTSGA SVPEVLVRGV LDYLAERGYD SVETVNTAEE
TLTFALPREL RPARTAR
|
|---|
| |