Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_1482 |
Symbol | |
ID | 8550829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 1543980 |
End bp | 1545191 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003272653 |
Protein GI | 262201445 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000899768 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCAGA TTCCCCGCGG CATCTGGGTG CTGCTGTCGG CCAATGTGGT CATCGCGCTC GGATACGGAC TCATCGCGCC CGCGTTGCCG AGCTTCGCGC GCAGTTTCAA CGTGTCGTTC ACCGCGGCCA CAGCGGTGGT GTCGGCCTTC GCGGTGATGC GACTGCTGTT CGCCCCGGCC ACCGGACGGC TGGTGACGTT GTTCGGTGAG CGGCGGATCT ACCTGATCGG TCTGCTGATC GTGGCGGCGA GCACGTTCGC GTGTGCGTTC GCCCAGTCGT ATTGGCAGTT ACTGGTGTTC CGGGCGGCCG GCGGCGTGGG GTCGACGATG TTCACCGTCT CGGCGATGGC CCTGCTGATC CGCATGTCGC CGAACGACAT TCGCGGCCGC GTATCCGGGT TCTTCTCGGC CGGCTTCCTG ATCGGCAACA TCACCGGACC GCTCATCGGC GCGGCGCTGG TGGGGTTCGG GCTGCGGATG CCGTTCGTCG TGTACGCCGT GGCCCTGCTC ATCGCGTCCG CCGTGGTCGC CACCCAACTG CGCGAGGTGA GTGCGCCGGA GAGCGCCGAC GGCCCGGCGC ATGGCGTGAT CTCGTTCCGG CATGCTCTCG GCGACAGCGC CTATCGTGCC ATCATCGCCT CGAACTTCAC CCAGGGATGG GCATCGATGG GGGTCCGGGT CGCGGTGGTC CCGTTGTTCA TCACCGAGGG GCTCGGCGAG GGTGCCGGGA TGGCCGGTGT GGTGCTCGCC GTGTACGCGG CGGGCAACGT GGCGGCCATC CTGACCGCGG GACGCCTCTC CGACCGATTC GGCCGTCGCC CCGTCATGCT GCCCGGACTG ACTCTCATGG CCGCCGCGAC CGCCGCGCTC GGGTTCTCGT CGAACATCAT TGTGGCGCTG GTATTGTCGC TGATCGCCGG AGCCGGTTCC GGGCTGTTCG CGCCGACGCA TCAGGCAGCT CTCGCCGACG TGCTGGGCAA CCGCCGGCAG GGCGGATCGG CGCTCGCCGC CTTCGGCATG TCCTCGGATG TCGGTGCCAT CAGCGGGCCG GTGATCGTCG GATTCGTCGC CGACCGTGTG GGTTTCGGCC CGGCGTTCAT CCTCACCGGG GTCGTCGCCG CACTGGCTCT GCTCATGTGG GTGTTCGCCC GGGAGACCGC TCCGGCGATC GTCGGTGACG GCCCGACCAT CACCTCCACC GAGCCGCAGT GA
|
Protein sequence | MKQIPRGIWV LLSANVVIAL GYGLIAPALP SFARSFNVSF TAATAVVSAF AVMRLLFAPA TGRLVTLFGE RRIYLIGLLI VAASTFACAF AQSYWQLLVF RAAGGVGSTM FTVSAMALLI RMSPNDIRGR VSGFFSAGFL IGNITGPLIG AALVGFGLRM PFVVYAVALL IASAVVATQL REVSAPESAD GPAHGVISFR HALGDSAYRA IIASNFTQGW ASMGVRVAVV PLFITEGLGE GAGMAGVVLA VYAAGNVAAI LTAGRLSDRF GRRPVMLPGL TLMAAATAAL GFSSNIIVAL VLSLIAGAGS GLFAPTHQAA LADVLGNRRQ GGSALAAFGM SSDVGAISGP VIVGFVADRV GFGPAFILTG VVAALALLMW VFARETAPAI VGDGPTITST EPQ
|
| |