Gene Gbro_1138 details

Gene Information

• Locus tag: Gbro_1138
• ID: 8550478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: +
• Start bp: 1197259
• End bp: 1200765
• Gene Length: 3507 bp
• Protein Length: 1168 aa
• Translation table: 11
• GC content: 65%
• Product: DNA-directed RNA polymerase, beta subunit
• Protein accession: YP_003272339
• Protein GI: 262201131

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTGGAAG GACGCATCTT GGCAGTCAAC CGCCAGTCCA CCTCAACAAT CCCAGGCGCG 
CCGCATCGCG CGTCTTTTGC AAAGATCAGT GAGCCGCTGG AGGTGCCTGA CCTCCTCGAC 
CTCCAACTCG ATTCCTTCGA ATGGCTCGTC GGTTCCCCGG AATGGCGCGC CAAGGCCATC 
GCGCGCGGCG AGGAGAATCC GACCGGAGGC CTCGAAGACA TCCTGCATGA GCTGTCCCCG 
ATCGAGGACT TCTCCGGTTC GATGTCGCTG TCCTTCTCCG ATCCGCACTT CGACGAGGTC 
AAGGCCTCCG TCGAGGAGTG CAAGGACAAG GACATGACCT ACGCGGCGCC GTTGTTCGTC 
ACCGCGGAGT TCATCAACAA CAACACCGGT GAGATCAAGT CGCAGACCGT GTTCATGGGC 
GACTTCCCGA TCATGACCGA CAAGGGCAGC TTCATCATCA ACGGCACCGA GCGTGTCGTG 
GTGAGCCAGC TGGTGCGCAG CCCGGGCGTC TACTTCGACG CCGCGATCGA CAAGGCCACC 
GAGAAGACCC TGCACACCGT CAAGGTCATC CCGGGCCGTG GCGCGTGGCT CGAGTTCGAC 
GTCGACAAGC GCGACACCGT CGGCGTGCGC ATCGACCGCA AGCGCCGTCA GCCGGTCACC 
GTGCTGCTCA AGGCGCTGGG TCTGACCACC GAGGAGATCA CCGAGCGATT CGGTTTCTCC 
GAGATCATGA TGTCCACCCT GGAGAAGGAC AACACCGCCA ACCAGGACGA GGCGCTGCTC 
GAGGTCTACC GCAAGCTGCG TCCGGGTGAG CCGCCGACCA AGGAGTCCGC GGAGAACCTG 
CTGGAGAATC TGTTCTTCAA GGACAAGCGC TACGACCTCG CCCGCGTCGG CCGCTACAAG 
GTCAACAAGA AGCTCGGTCT GACCGACAAC CCGATGGTCG GTGAGTCCAC GCTGACCCGC 
GAGGACATCG TCGCAACCGT CGAGTACCTG GTGCGTCTGC ACGAGGCCGA TCCGCACACC 
ACCACCTACA TGACCGTCCC CGGCGGCGTG GAGGTCCCGG TGGAGGTCGA CGACATCGAC 
CACTTCGGCA ACCGTCGCCT GCGTACCGTC GGCGAGCTGA TCCAGAACCA GATCCGCGTG 
GGCCTCTCGC GTATGGAGCG TGTCGTGCGT GAGCGCATGA CCACCCAGGA CGTCGAGGCG 
ATCACCCCGC AGACCCTGAT CAACATCCGT CCCGTCGTGG CGGCGATCAA GGAGTTCTTC 
GGCACCAGCC AGCTGTCGCA GTTCATGGAC CAGAACAACC CGCTGTCGGG TCTGACCCAC 
AAGCGTCGCC TGTCGGCGCT GGGCCCGGGC GGTCTGAGCC GTGAGCGTGC CGGCCTCGAG 
GTGCGCGACG TGCACCCCAG CCACTACGGC CGCATGTGCC CGATCGAGAC CCCGGAGGGA 
CCGAACATCG GTCTCATCGG TTCGCTGTCG GTCTACGCGC GGGTCAATCC GTTCGGCTTC 
ATCGAGACCC CGTACCGCAA GGTTGTCGAC GGTGTGGTCA CCGACCAGAT CGAGTACATG 
ACCGCCGACG AGGAAGATCG TTACCTCATC GGTCAGGCCA ACACGACCTA TGACACCGAC 
GGCAACATCA CCGACGAGCG CGTCCTGGTC CGCAAGAAGG GCTCCGAGGT GGAGTTCGTC 
GACGCGGCAC AGGTCGAGTA CCTCGACGTC AGCCCGCGCC AGATGGTGTC GGTCGCGACC 
GCGATGATCC CGTTCCTCGA GCACGACGAC GCGAACCGCG CGCTGATGGG CGCCAACATG 
CAGCGTCAGG CCGTGCCGCT GGTGCGCAAC GAGTCGCCGC TGGTCGGTAC CGGCATGGAA 
CTGCGTGCCG CCGTCGACGC CGGTGACGTG GTGGTCTCGG ACAAGACCGG TGTGGTCGAG 
GAGGTCTCCG CCGACTACAT CACCGTGATG GCCGACGACG GCACCCGCGA CACCTACCGG 
ATGCGCAAGT TCGCGCGTTC CAACCACGGC ACCTGCGCCA ACCAGCGTCC CATCGTGGAC 
GAGGGTCAGC GGGTGGAGTC CGGCCAGGTC CTCGCCGACG GCCCCTGCAC CGAGAACGGT 
GAGATGGCGC TCGGCAAGAA CCTGCTCGTG GCGATCATGC CGTGGGACGG TCACAACTAC 
GAGGACGCCA TCATCCTGAG CCAGCGGCTC GTGGAGGAGG ACGTGCTCAC CTCGATCCAC 
ATCGAGGAGC ACGAGATCGA CGCCCGCGAC ACCAAGCTCG GTGCCGAGGA GATCACCCGG 
GACATCCCGA ACGTCTCCGA CGAGGTCCTC GCCGACCTCG ACGAGCGCGG CATCGTGCGC 
ATCGGTGCGG AGGTCCGCGA CGGCGACATC CTGGTCGGCA AGGTCACCCC GAAGGGCGAG 
ACCGAGCTGA CCCCGGAAGA GCGTCTGCTG CGTGCCATCT TCGGTGAGAA GGCCCGCGAG 
GTGCGCGACA CCTCGCTCAA GGTCCCGCAC GGTGAGACCG GCAAGGTCAT CGGCGTCCGC 
GTCTTCAGCC GCGACGACGA CGACGATCTC GCGCCCGGCG TCAACGAGCT CGTGCGCGTG 
TACGTCGCTC AGAAGCGCAA GATCCAGGAC GGCGACAAGC TCGCCGGCCG CCACGGCAAC 
AAGGGCGTCA TCGGCAAGAT CCTGCCCGCC GAGGACATGC CGTTCCTGCC GGACGGCACC 
CCGGTCGACA TCATCCTCAA CACCCACGGT GTGCCGCGTC GTATGAACAT CGGCCAGATC 
CTGGAGACCC ACCTCGGTTG GGTCGCCAAG GCCGGCTGGA ACATCAACGT GGCAAATGGT 
GTGCCGGATT GGGCGTCGAA GCTGCCCGAG GACATGTACT CGGCCGAGCC CGACACCAAC 
ACCGCCACCC CGGTGTTCGA CGGTGCGCGT GAGGAGGAGC TGACCGGACT GCTGTCCTCG 
ACGCTGCCCA ACCGCGACGG CGAGGTGATG GTCAACGGCG ACGGCAAGGC AACACTGTTC 
GACGGACGTT CCGGCGAGCC GTTCCCGTAC CCGGTGTCGG TGGGCTACAT GTACATCATC 
AAGCTTCACC ACCTGGTGGA CGACAAGATC CACGCGCGTT CCACCGGTCC GTACTCGATG 
ATCACCCAGC AGCCGCTCGG TGGTAAGGCG CAGTTCGGTG GTCAGCGTTT CGGTGAGATG 
GAGTGCTGGG CCATGCAGGC CTACGGCGCC GCCTACACCC TGCAGGAGCT GCTGACCATC 
AAGTCGGACG ACGTGGTCGG CCGCGTGAAG GTGTACGAGG CGATCGTCAA GGGCGAGAAC 
ATCCCGGAAC CGGGTATCCC CGAGTCGTTC AAGGTGCTCC TCAAGGAACT GCAGTCGCTG 
TGCTTGAACG TCGAGGTGCT CAGCTCTGAC GGTGCGGCCA TCCAGATGCA CGACACCGAC 
GACGAAGACC TGGAGCGTGC TGCGGCCAAC CTCGGAATCA ACTTGTCGCG CAACGAATCC 
GCCACGGTCG ACGATCTCGC CAACTGA 

 

Protein sequence

MLEGRILAVN RQSTSTIPGA PHRASFAKIS EPLEVPDLLD LQLDSFEWLV GSPEWRAKAI 
ARGEENPTGG LEDILHELSP IEDFSGSMSL SFSDPHFDEV KASVEECKDK DMTYAAPLFV 
TAEFINNNTG EIKSQTVFMG DFPIMTDKGS FIINGTERVV VSQLVRSPGV YFDAAIDKAT 
EKTLHTVKVI PGRGAWLEFD VDKRDTVGVR IDRKRRQPVT VLLKALGLTT EEITERFGFS 
EIMMSTLEKD NTANQDEALL EVYRKLRPGE PPTKESAENL LENLFFKDKR YDLARVGRYK 
VNKKLGLTDN PMVGESTLTR EDIVATVEYL VRLHEADPHT TTYMTVPGGV EVPVEVDDID 
HFGNRRLRTV GELIQNQIRV GLSRMERVVR ERMTTQDVEA ITPQTLINIR PVVAAIKEFF 
GTSQLSQFMD QNNPLSGLTH KRRLSALGPG GLSRERAGLE VRDVHPSHYG RMCPIETPEG 
PNIGLIGSLS VYARVNPFGF IETPYRKVVD GVVTDQIEYM TADEEDRYLI GQANTTYDTD 
GNITDERVLV RKKGSEVEFV DAAQVEYLDV SPRQMVSVAT AMIPFLEHDD ANRALMGANM 
QRQAVPLVRN ESPLVGTGME LRAAVDAGDV VVSDKTGVVE EVSADYITVM ADDGTRDTYR 
MRKFARSNHG TCANQRPIVD EGQRVESGQV LADGPCTENG EMALGKNLLV AIMPWDGHNY 
EDAIILSQRL VEEDVLTSIH IEEHEIDARD TKLGAEEITR DIPNVSDEVL ADLDERGIVR 
IGAEVRDGDI LVGKVTPKGE TELTPEERLL RAIFGEKARE VRDTSLKVPH GETGKVIGVR 
VFSRDDDDDL APGVNELVRV YVAQKRKIQD GDKLAGRHGN KGVIGKILPA EDMPFLPDGT 
PVDIILNTHG VPRRMNIGQI LETHLGWVAK AGWNINVANG VPDWASKLPE DMYSAEPDTN 
TATPVFDGAR EEELTGLLSS TLPNRDGEVM VNGDGKATLF DGRSGEPFPY PVSVGYMYII 
KLHHLVDDKI HARSTGPYSM ITQQPLGGKA QFGGQRFGEM ECWAMQAYGA AYTLQELLTI 
KSDDVVGRVK VYEAIVKGEN IPEPGIPESF KVLLKELQSL CLNVEVLSSD GAAIQMHDTD 
DEDLERAAAN LGINLSRNES ATVDDLAN