| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1130 |
|---|
| Symbol | |
|---|
| ID | 8550470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 1187580 |
|---|
| End bp | 1188911 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_003272331 |
|---|
| Protein GI | 262201123 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTAT TACGCCGGCG GCTGCTCGGT CTCGTGTTCT TCATCATCGT CGCGCTGTTC
TTCACGGTGA CGATCATGAA GTTCAACAAT TCCTTCACCG ACTACACCGA GGTGACGCTC
AAGACGGATT CGACGGGCAA TGCGCTGCCC TCCAACGCCG ACGTGAAAGC GCGCGGCGTG
GTGGTCGGCG AGGTGCGTCG CGTCGAACCC GCGCCCGACG GAAGCGTCGA CGTGATCCTC
GGGCTCACCC CGTCGATGGC CGACGAGCTC CCCGCCTCGA CCACCGCTCG CATCCTCCCG
AAGACGCTCT TCGGTGAACG GTATGTGGCG CTGCAGGTCC CCGAGACCAC CGGCGGCCCG
ACGCTGACCA ACGGTGCGTC GATCGCCACC GACACCAGCG GCAATGCCCG CGAGGTCCAG
GAGCTGTTCG ACAAGCTGCT GCCGGTCCTC GAGGCGATCC CGCCGCAGGA CCTCAACGTC
ACGCTGACGT CGCTGTCGTC GGCGTTGTCG GGACGTGGGG AGCAGATCGG CACCACCCTC
GACGAGCTCA ACACCATCTT CGCCCGCATC AATGAGCACA TGCCCGAGCT GCAGGGCACC
CTGCGCGGGC TCGCGAGTTT CTCCCAGACC TACTCGGAGG CACTGCCGGA CGTGATCGAC
GCCCTCGACA ACCTGCGCAC GACGAGCAAC ACCATCGTCG AACGTCAAGG TGATCTGCGG
ACGCTGATCT CGACCCTGGG GGTTGCGGCG ACCGACACCA CCGGCTGGCT GCGGCAGAAC
CGCACCGACC TCATCGACCT GTTCGTCGAT TCCGAACCGT TCCTGGTGGG CCTGGCCAAG
CAGTCGCCGA CCTTCGTGTG CACCTTCCGC AACTTCGCGG GGCTGATCCC GGAGTCGAGG
CGCATCGTCG GGCAGGGCAC CAAGAATCCG GGCGTGCGGG TGAACCTGCA GTTCGTCAAC
CCGCGTGGAC GGTACCTGCC CAACCAGGAC GAGCCGCGGC TGCTGGACCG CGACCCACCG
GCGGTGTGTT ACGAGCCGGC GCGTGACGGC CGACCGTTCC CGCAGTACCC CGGCGGCGGC
CTGGCTGACG GCAGCTACCA GCCGCCGTCG CGCAACGCCG GTCCGCGCAC CGTCAAGACG
CTGCCGCAGC CCCAGTTCAG CGGCATGCCG GCGGGCACGG TTCGCTCCAA CCCGTACGAC
GACCCCGACT ACGTCAATCA GCTCAAGGTG ATCTACGGCG CCACCAGCGG CGTCGATCCC
AAGGACGTCC CGAGCTGGGT CACCATGATC GGTGGCGCGA CGCTGCAGGG AGCGCAGGTC
GACATCAAAT GA
|
|---|
| Protein sequence | MTVLRRRLLG LVFFIIVALF FTVTIMKFNN SFTDYTEVTL KTDSTGNALP SNADVKARGV
VVGEVRRVEP APDGSVDVIL GLTPSMADEL PASTTARILP KTLFGERYVA LQVPETTGGP
TLTNGASIAT DTSGNAREVQ ELFDKLLPVL EAIPPQDLNV TLTSLSSALS GRGEQIGTTL
DELNTIFARI NEHMPELQGT LRGLASFSQT YSEALPDVID ALDNLRTTSN TIVERQGDLR
TLISTLGVAA TDTTGWLRQN RTDLIDLFVD SEPFLVGLAK QSPTFVCTFR NFAGLIPESR
RIVGQGTKNP GVRVNLQFVN PRGRYLPNQD EPRLLDRDPP AVCYEPARDG RPFPQYPGGG
LADGSYQPPS RNAGPRTVKT LPQPQFSGMP AGTVRSNPYD DPDYVNQLKV IYGATSGVDP
KDVPSWVTMI GGATLQGAQV DIK
|
|---|
| |