Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_0858 |
Symbol | |
ID | 8550194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 916569 |
End bp | 917174 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | regulatory protein TetR |
Protein accession | YP_003272064 |
Protein GI | 262200856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00117784 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCA ACCGTCGGAC CCAGGCAGAG CGCACCGCGG CGACTCGCGC CGCCCTCATC GGTGCCGGTC GCGAACTCTT CGGCGAACAC GGTTACGCCT CGGTCGGCAC CCAAGTCATC GTCGAGGCCG CCGGGGTCAC CCGCGGAGCG CTCTATCACC AGTTCGGGGA CAAGAAGGGG CTGTTCACGG CGGTATTCGA TGCACTGGAG CAGGAGGTGG TCGCACTCTG CGCCGACGCG ATGACCGACC TCGCGCCCAC CGACCCGATC GCCGCGCTCA AGGTCGGCAT CCGGGCGTTT CTCGAGGTCT TCACCGATCC GGTGCGTCAT CGTATCGGCC TCGTGGATGC CCCCTCGGTC CTCGGCTGGC AGGAGTGGCG TGCGCGCGGT GAAGAGTTCG GCTTCGCCCT GATCGAGGGA CTGCTGCAGG CGTCCATCGA ACTGGGGCAG ATGGCCGATC AGCCCATCCG GCCGATCGCG CACGTCGCCA TCGGAGCGCT CGACGAGTCC GCGCTCTATG TCGCCGCGGC CGCCGACCGC CAACAGGCCG TCGCCGAGGT GACGGTGGTG CTCGACCGCA TCGTCGATTC CTTTGCGATC ACCTGA
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Protein sequence | MKVNRRTQAE RTAATRAALI GAGRELFGEH GYASVGTQVI VEAAGVTRGA LYHQFGDKKG LFTAVFDALE QEVVALCADA MTDLAPTDPI AALKVGIRAF LEVFTDPVRH RIGLVDAPSV LGWQEWRARG EEFGFALIEG LLQASIELGQ MADQPIRPIA HVAIGALDES ALYVAAAADR QQAVAEVTVV LDRIVDSFAI T
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