| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_0619 |
|---|
| Symbol | |
|---|
| ID | 8549954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 655554 |
|---|
| End bp | 657209 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003271840 |
|---|
| Protein GI | 262200632 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTC GGTTGGTGCT ACTTCTCACG GTGATCGGCC TCGCGGTCGC CCTGGTGGCC
GGGTGTGGGA GCACCCCCGA GGGTGCTCCG GTGAAGGTGA CCGGCGCCGA CCTCAACGAG
CAACCGCGAG ACAACATCCG TGATGGCGGA AGCCTGACGA CCGCCGTGGT TGAGGTGTCC
CCGCAGTGGA ACACCTTCCA AGCCGATGGC ACCGCCTACA CGCTGACCTT GTGGCGTTGG
TACAACCCGA CTCTCGCGTT CTTCTCACCC GACGGTGAGT ACCGTCCCAA CCCGGACTAC
GTGACCCGAG TCGACAAGAA ACTCGTCGAC GGCAACACCA CGGTCACCTA CACGCTGAAC
CCGAAGGCGT TCTTCAACGA CGGCACACCC ATCGACTACC GCGCCTTCGA GGCCACCTGG
AAGACCAGCA ATGGCACCGA TCCTCGCTAT CTGGTCAGTT CCACCGACGG TTACCGCCAG
ATCGCCTCGG TGACCCGCGG CATCAACGAC CGGCAGGTGG TGGTCCGCTT CCGCGGCGTC
TATGCCTGGG TCGACGGTCT GTTCAACTAT GTCCTGCACC CCAAGGCCGC CGATCCGGAG
CTGTACAACA GTGGCTACCT GCAGAATCCG CATCCCGAGC TAGGTGCCGG CCCGTACACG
ATCGCGTCCT ATGATCGCAA TCAGGGGACC GTGGTCTTCG AACGCAATCC CAAGTGGTGG
GGAAACCCGG GCAAACTCGA TCGCCGAGTG TTCCGGCAGA TGGAGTCGCA GGCAGCACTC
AACGCCTTCC GTAACGGCGA GATCGACGCG AGCGGGGTGG GCACCAAGGA CCGTCTGGCA
CAGGTCCAGT CCATGGACGG GATTCAGATC CGGACATCGG CGACCCCAGC ACAGTCCCTG
CTCGTGCTCA ACATGCAGGC GGCCATCCTC TCCGACAGCC GCGTCCGCGA GGCGGTCCTG
CGCGGCACGG ATCGGGCCAC TCTCGCCAAG ATCGAGTTCA ACGGGCTGAA CTACTCCGAA
CAGTTGCCTG GATCGTTTCT GCTGTATCCA TTCCAGCCCG GATATGCCGA CAACGTCGCC
GGCGTCATCG ACTACGACCC GGAGAAGGCG AAACAGCTTC TCGACCAAGC CGGTTGGGTT
GTCGGGGGCG ACGGTATCCG CGTCAAAGGT GGACAGCGGC TTCGGCTGAC GTTCCCCATC
CTCGGCGACG ATCCCACGCA GCAGAACATC GTCCGTGCCT ACCAGTCGAT CCTGAAGAAC
ATCGGTGTCG ACCTCAACGT CGTCCAGCGG CCGTCCTCGG ACTTCTCAAA GGTGATCACC
AACAAGGAAT TCGACGCGTT CATGATGGGG TTCTCGTCAA GCGATCCCTT CGGACTGGCG
TACTTCTGCC AGGTGTGGTG CAAGGGATCG CAGCTCAACA AGGCCGGTGC CGGATCGCCG
GAACTCGACG CCGAGATCCG GCGGGTCGGG CAGATCGCCG ACCCGCAGGC GCAGATCGCC
GAGGGAAACA AGGTGGAGCG CACGGCTTTC GCTCAGTTCT CCAACCTTCC GCTGTCCAAC
GGACCGACGA TGGTCGCGGT CAAGTCGGGG CTCGCGAACT ACGGTGCCGG GCTGTTCTAC
GTCGGTCCCG TGGAGGATAT CGGCTGGCAG AAGTAG
|
|---|
| Protein sequence | MKRRLVLLLT VIGLAVALVA GCGSTPEGAP VKVTGADLNE QPRDNIRDGG SLTTAVVEVS
PQWNTFQADG TAYTLTLWRW YNPTLAFFSP DGEYRPNPDY VTRVDKKLVD GNTTVTYTLN
PKAFFNDGTP IDYRAFEATW KTSNGTDPRY LVSSTDGYRQ IASVTRGIND RQVVVRFRGV
YAWVDGLFNY VLHPKAADPE LYNSGYLQNP HPELGAGPYT IASYDRNQGT VVFERNPKWW
GNPGKLDRRV FRQMESQAAL NAFRNGEIDA SGVGTKDRLA QVQSMDGIQI RTSATPAQSL
LVLNMQAAIL SDSRVREAVL RGTDRATLAK IEFNGLNYSE QLPGSFLLYP FQPGYADNVA
GVIDYDPEKA KQLLDQAGWV VGGDGIRVKG GQRLRLTFPI LGDDPTQQNI VRAYQSILKN
IGVDLNVVQR PSSDFSKVIT NKEFDAFMMG FSSSDPFGLA YFCQVWCKGS QLNKAGAGSP
ELDAEIRRVG QIADPQAQIA EGNKVERTAF AQFSNLPLSN GPTMVAVKSG LANYGAGLFY
VGPVEDIGWQ K
|
|---|
| |