| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_0618 |
|---|
| Symbol | |
|---|
| ID | 8549953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 653380 |
|---|
| End bp | 655557 |
|---|
| Gene Length | 2178 bp |
|---|
| Protein Length | 725 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_003271839 |
|---|
| Protein GI | 262200631 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.726649 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCGTC GTGACGGGGG CATCGTGACA GAGGCTCTTG ATCACGACGT TCTCGCCGAG
GTAGCCGAAC CGGGCGAGGT GGTCCTGCGC GTCGACGATT TGCACGTCTC CTTCGGCAGC
GAAGCCGGCC GCGTGCAGGC CGTTCGCGGA TTGTCGTATG AATTACGGGC CGGTCGGACA
ACGGCCATCG TCGGCGAGAG CGGTTCGGGT AAGTCGGTGT CGGCGATGGC GCTGCTCGGG
CTGCTGCCCG ACTCCGCCCG GATCAGCGGA TCGGTGCGAC TCGGCGATCG TGAACTCATC
GGCCGGTCTG ACAAGGAGAT GTCGCGCATC CGCGGCAACG AGATCGCGAT GATCTTCCAG
GACCCGCTGT CGTCACTGAC TCCGGTCTTC ACCGTCGGCG CGCAGATCGT CGAGGCGCTG
GCGGCTCATC AGCGCATCGA AAGCCGGCAG GCGTGGGACC GGGCGGTGGA ACTGCTCGAG
CTCGTCGGCA TCCCCGACCC CGTGCGCCGA GCCAAGGCCT ACCCGCATGA ACTGTCCGGC
GGGATGCGCC AGCGAGTCAT GATCGCGATG GCGATGGCCA ATGACCCGGC CGTGATCGTC
GCCGACGAAC CGACCACCGC TCTGGATGTG ACCATCCAGG CGCAGATCCT CGATCTGCTG
GCGACCGCGC AACGGGAGAC CGGTGCCGCG GTCCTGCTCA TCACTCACGA TCTCGGTGTG
GTGGCCGGTA CCGCCGACGA CGTCGTGGTG ATGTATGCGG GCCGGCCGGT GGAGCAGGCC
GACGTCGACA CCCTTTTCCG TGAGCCGCGG ATGCCCTACA CCATCGGGCT TCTCGGTGCG
GTGCCTCGCG TGGATCGACG CGTCGACGCC TTGGTGCCGA TCCCTGGCTC GCCGCCGGTG
CTGATCGACC CGCCCGATCA ATGCATGTTC GCGCCCCGGT GTCCCCTCGC GATCGACGAA
TGTCGTTCTG CCGAACCGGC TTTGCATGAT GTGGGTGGCC CCGGTGGGCA CACCGCCGAT
GAACACACCG CCGCCGCGCA TACGGCCGCG TGCGTGCGCT CCGCCGAGAT CGTCGGCAAC
GGCGTACTGG TCGACGCGGC CGGCGCGCAA CGGCCCGTGT ATCCCGAACC CGAAGTGGTG
GCGCGTGCCG AGGTCGTGTC CGTACCGCGA GCGCAACGGG ACATCGTGCT CGACGTCGCC
GGGATGACGA AACTCTTCCC GCTGACCAGT GGATTACTCA AGCGACGGAT CGGGACGGTG
CGCGCGGTGC GTGGGGTGTC CTTCGACATC CGGGCGGGTG AGTCGTTGGC CATCGTCGGC
GAATCCGGCA GCGGGAAGTC GACGACGCTG CTCGAGGTGA TGGATTTCGC TCAGCCGGCA
GGCGTCGTGC GGATCGGCGG CGTGGACCCG GCGGCGGTGC GCAAGCGTGC GGCCCGGGCG
TTGCGCCAAG ACGTCTCGAT CGTCTTCCAG GATCCGGCCG AGGCGCTCGA CCCGCGCTTC
ACCGCCTTCG ACATCATTGC CGAACCGCTT CGCGCCCTGG GGGTTCCGCG GTCGGAGGCC
GCGCAGAAGG TGACCGATCT GCTCGCGCGT GTCGGGCTCG ATCCGGTGCA CTCCGATCGC
TTCCCGGCGG CGTTCTCCGG CGGTCAACGG CAGCGGCTCG CGATCGCGCG GGCGTTGGCG
ACCGATCCGT CGCTGATCAT CCTCGACGAG CCGCTCTCGG CGCTCGACGT ATCGGTGCAG
GCCGAGATCG TCAACCTCAT CCGGCGCCTG CAGTCGACCG GTGATGTTGC CTATTTGGTT
GTCGCCCACG ATCTCTCGGT GATCAGGCAT CTCGCCGACC GGGTGGCCGT GATGTATCTG
GGCGAGTTCG TCGAGGTGGG GGAGACCGAG CAGGTCTTCG ACGCACCCGC CCATCCGTAC
ACCAAGGCGC TACTGTCTGC GGTGCCGATC CCCGATCCGG CGGCCGAGCG CGCCCGAACG
CCGATCGTGC TGCGCGGTGA GCAGCCCAGT CCCACCGACG ACATCGTCGG ATGCTGCTTC
ACCGGGCGCT GCCCCCTGTA TGTCACACTC GATCCCGAGC GCCAATCCCG GTGCCGGAGC
GTTCATCCGG AGTTGCGTGC GATCGGCCCG GCCGACGACC ACGTGGCATC CTGTCATTAT
CTGGAGGTCG ACGCATGA
|
|---|
| Protein sequence | MARRDGGIVT EALDHDVLAE VAEPGEVVLR VDDLHVSFGS EAGRVQAVRG LSYELRAGRT
TAIVGESGSG KSVSAMALLG LLPDSARISG SVRLGDRELI GRSDKEMSRI RGNEIAMIFQ
DPLSSLTPVF TVGAQIVEAL AAHQRIESRQ AWDRAVELLE LVGIPDPVRR AKAYPHELSG
GMRQRVMIAM AMANDPAVIV ADEPTTALDV TIQAQILDLL ATAQRETGAA VLLITHDLGV
VAGTADDVVV MYAGRPVEQA DVDTLFREPR MPYTIGLLGA VPRVDRRVDA LVPIPGSPPV
LIDPPDQCMF APRCPLAIDE CRSAEPALHD VGGPGGHTAD EHTAAAHTAA CVRSAEIVGN
GVLVDAAGAQ RPVYPEPEVV ARAEVVSVPR AQRDIVLDVA GMTKLFPLTS GLLKRRIGTV
RAVRGVSFDI RAGESLAIVG ESGSGKSTTL LEVMDFAQPA GVVRIGGVDP AAVRKRAARA
LRQDVSIVFQ DPAEALDPRF TAFDIIAEPL RALGVPRSEA AQKVTDLLAR VGLDPVHSDR
FPAAFSGGQR QRLAIARALA TDPSLIILDE PLSALDVSVQ AEIVNLIRRL QSTGDVAYLV
VAHDLSVIRH LADRVAVMYL GEFVEVGETE QVFDAPAHPY TKALLSAVPI PDPAAERART
PIVLRGEQPS PTDDIVGCCF TGRCPLYVTL DPERQSRCRS VHPELRAIGP ADDHVASCHY
LEVDA
|
|---|
| |