| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_0513 |
|---|
| Symbol | |
|---|
| ID | 8549847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 562988 |
|---|
| End bp | 564943 |
|---|
| Gene Length | 1956 bp |
|---|
| Protein Length | 651 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | acetate/CoA ligase |
|---|
| Protein accession | YP_003271736 |
|---|
| Protein GI | 262200528 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCG CCACACAGCC AACCCCCACC AAGGCCTACC CGCCGTCCGA CGAGTTCGCC
GCGCAAGCCA ACGCGCCCGC CGAACTCTAC GATCGCGCCG ACGCCGACCG GCTCGAGTTC
TGGGCCGAGC AGGCCCGCCG CCTCGACTGG GACACCGATT TCGATCAGGT TCTCGACTGG
TCGGATGCCC CGTTCGCCAA GTGGTTCGTC GGCGGCAAAC TCAACGTCGC CTACAACTGT
GTGGATCGCC ATGTCGATGC GGGCAAGGGT GACCGGGTCG CGATCCACTG GGTCGGCGAG
CCCGGCGATC ACCGCGACCT GACCTACGCC CAGCTCAAGG ACGAGGTGTC CAAGGCGGCC
AACTACTTCT CCTCGATCGG CCTCGAAGCC GGCGACCGGG TGGCCATCTA CATGCCGATG
GTCCCCGAAG CCCTCATCTC GATGCTCGCC TGCGCCCGCC TCGGCCTGAC TCACTCGGTG
GTTTTCGCCG GGTTCTCCTC GGGTGCCCTG CGCTCCCGCG TCGACGACGC CGAGGCCAAA
CTCGTCATCA CCACCGACGG CCAGTACCGG CGCGGTAAGC CGGCGCCGCT GAAGACTCAG
GTCGACGAGG CGCTGGGCAC CGGCGACGAC GCGGCGAAAT CCGTCGAGAA GGTCCTCGTG
GTGCGCCGCA CCAACCACGA TCCCGAGATG AACTGGGTCG AGGGCCGCGA CGTGTGGTGG
GCCGACACCG TCGACGAGCA GTCCACCGAG CACACCCCGG AGGCCTTCGA CTCCGAGCAC
CCCCTGTTCC TGCTCTACAC CTCCGGCACG ACCGGCAAGC CCAAGGGCAT CGTGCATTCC
TCGGGCGGCT ATCTCACCCA GACGTCGTAC ACCTTCCACA ACGTGTTCGA CCACAAGGAA
GGCCGTGACG TCTTCTGGTG CGGCGCCGAC ATCGGCTGGG TGACCGGACA CTCCTACCTC
GTCTACGGCC CGCTCTCCAA CGGCGCCACC GAGGTGGTCT ACGAGGGCAC GCCCAACTCC
CCCAACGAGC ACCGCCACTT CGAGATCATC GAAAAGTACG GTGTCACAAT CTATTACATC
GCGCCGACGC TGATCCGCAC CTTCATGAAG TGGGGCCGGG AGATCCCCGA CGCCCACGAC
CTGTCCAGCG TGCGGCTGCT CGGCTCGGTG GGCGAGCCGA TCAACCCCGA GGCGTGGAAG
TGGTACCGCG AGGTCATCGG CGGCGACAAG GCCCCCATCG TGGACACCTG GTGGCAGACC
GAGACCGGCG CCATCATGAT CTCCCCGCTG CCCGGCGTGA CCGCGACCAA GCCGGGATCG
GCGATGAAGC CGCTGCCCGG CATCTCGGCC AACATCGTCG ACGACCAGGG CAACCCCGTC
GGCGCCGGTG AACAGGGCTA CCTCGTGCTC GATCAGCCGT GGCCGTCGAT GCTGCGCGGC
ATCTGGGGCG ACGACGAGCG CTTCCGCGAG ACCTACTGGT CGCGCTTCGC CGAACAGGGC
TGGTACTTCG CCGGTGACGG CGCGCGCTAC GACGACGACC ACGCCCTCTG GGTGCTCGGG
CGAGTCGACG ACGTCATGAA CATCTCCGGG CACCGCATCT CCACCGCGGA AGTCGAGTCC
GCCCTCGTCG GACACTCCGG TGTCGCCGAG GCCGCGGTCA TCGGTGCCGC CGACGAGACC
ACCGGTCAGG GCATCGTCGC CTTCGTCATC CTGCGCGAAG GCGTGGAGAA CACCGGCGAC
CAGCTCATCG CCGAACTGCG CCAGCAGGTG TCGGTGGAGA TCTCCCCGAT CGCCAAACCC
CGCGAGATCA ACGTCGTCCC CGAGCTGCCC AAGACCCGCT CGGGCAAGAT CATGCGACGG
CTGCTCAAAG ACGTCGCCGA GGGCCGCGAA CTCGGCGACA CCTCGACACT GGTCGACCCG
TCCGTCTTCG AGGCCATCCG CGCCCGAAAG GCCTGA
|
|---|
| Protein sequence | MSSATQPTPT KAYPPSDEFA AQANAPAELY DRADADRLEF WAEQARRLDW DTDFDQVLDW
SDAPFAKWFV GGKLNVAYNC VDRHVDAGKG DRVAIHWVGE PGDHRDLTYA QLKDEVSKAA
NYFSSIGLEA GDRVAIYMPM VPEALISMLA CARLGLTHSV VFAGFSSGAL RSRVDDAEAK
LVITTDGQYR RGKPAPLKTQ VDEALGTGDD AAKSVEKVLV VRRTNHDPEM NWVEGRDVWW
ADTVDEQSTE HTPEAFDSEH PLFLLYTSGT TGKPKGIVHS SGGYLTQTSY TFHNVFDHKE
GRDVFWCGAD IGWVTGHSYL VYGPLSNGAT EVVYEGTPNS PNEHRHFEII EKYGVTIYYI
APTLIRTFMK WGREIPDAHD LSSVRLLGSV GEPINPEAWK WYREVIGGDK APIVDTWWQT
ETGAIMISPL PGVTATKPGS AMKPLPGISA NIVDDQGNPV GAGEQGYLVL DQPWPSMLRG
IWGDDERFRE TYWSRFAEQG WYFAGDGARY DDDHALWVLG RVDDVMNISG HRISTAEVES
ALVGHSGVAE AAVIGAADET TGQGIVAFVI LREGVENTGD QLIAELRQQV SVEISPIAKP
REINVVPELP KTRSGKIMRR LLKDVAEGRE LGDTSTLVDP SVFEAIRARK A
|
|---|
| |