Gene Gbro_0354 details

Gene Information

• Locus tag: Gbro_0354
• ID: 8549685
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: +
• Start bp: 390133
• End bp: 396396
• Gene Length: 6264 bp
• Protein Length: 2087 aa
• Translation table: 11
• GC content: 66%
• Product: Protein of unknown function DUF1998
• Protein accession: YP_003271582
• Protein GI: 262200374

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTCG CCCAACCCAG CCTCCCTTCG TTGCTGGCGG CAGAGACGCA AGAATCGATC 
GTCGAATACC TGACGACAAC CTTCGCCCTC TCCGATCCCG CGACCCAGAC GGCGTTGCGC 
GACTTCCTCG GTGACACCGA CACCGGCATC TTTCGCGGGC CCTACCTCAA GATCCGCACC 
CCGTACCAAC CTGTCGGTGA CGGCTGGGTG TCACCGCTGG AGTGGATGCC GTCGGGCTTT 
CGGCCCTTTC AACACCAGGC AGAGGCGTTT GCGCGACTCT CCACCAACGG GAAGGCGGCC 
CAGCCGACGA TCGTCACGAC CGGCACCGGA TCGGGAAAGA CGGAGTCGTT TCTCGTTCCG 
CTCCTGGATC ACTGCAAGAG AGCCGCGGCC CGCGGCGAGC GGGGAATCAA GGCGATCATC 
CTGTACCCGA TGAACGCACT CGTCACCGAT CAAGCTCGTC GCCTTGCCGA TTATCTGCAC 
GGTGATGAGC GCCTCGCCGG CGTGAGCGCC GGTGTCTACA TCGGCGGTGA GGGTAAACGA 
AGGCATGCCG GCCCCCATGC CCTGATCGAT CACCGGGACA CCCTGCGCGA CAACCCACCC 
GACATCCTGC TCACCAACTA CCGGATGCTC GATCTGCTCT TGCTGCGCCA GGCCGACACC 
CGCCTGTGGG ACAACGCGAC GACCACACTG CAGTATCTGG TGCTAGACGA GTTCCACACC 
TACGACGGAG CTCAGGGCAC CGACGTCGCC ATGCTCATCC GCCGTCTCGG TTCCCGGTTG 
GGACTGGAAG GTGCGGCCGG CCCGTTGGGG CGGGTCACCC CGGTCGCCAC CTCGGCCACC 
CTTGGTGGTG GCTCACAATC CGTCGAACTC CGTCGCTTCG CGAGCACCGT GTTCGGCTCC 
GACTTCGGGT CCGATTCGGT CGTAGGAGAG ACCTCGTTGG CACCCATCGA CGTTGTCCGC 
GAAGTCGATT TCACCCTTGA CATCCCCTCG GTCGCCGAGA TCCTGGCCGT CCCAGAACCC 
GTCGCCGACG ACCCGGCCTC GTGGGAGCCA CTGGCACGTA CCGTCCTCGC CGGCGGGCAA 
TCGGGCGCCG AGGACTTCTC CGATCCCGTC ACCATCGGTG GTGCACTGCG CCGACATTTC 
CTCACCCGCG TCGTCATCGA CGTCCTGGGC GCGCAGCCCC GTACCGTCGC AGACGCAGTG 
CTGGACGTCG CGCAGGCGGG CATCCTCCCG TGGGGAGTGC ACAACTCGAC GGCCCCACGC 
GAGGCGCAGA CCGCGCTGCT GAGATTCCTT GCGCTGCTGT CGATAGCGCG GGTGCGAGAC 
GTCTCCGGAT CGCTGCGCCC TCTGGTCAAT GTTCAGGTCC AGATGTGGGT ACGGGAACTC 
AGCCGCATGC TCCGACTGGT CTCCGACACC CCCGACTTCC GTTGGTGGCA CTCGGGTCCC 
GCCGAAGGAC AACGACATCT GCCCGCGACC TACTGCCGAG TGTGCGGACG ATCCGGATGG 
ATGGCCGCGA CCACCGAACT CGGCGACAGC CTCTCCGGTG AATCACCGGC CATCTGGCGC 
AACAGCGCGC GGTCCGGCAG CCGTGCGAAA AACCGCGTGA TGCTCGCAGC CAACCCGGCC 
GAAGACGGGG TTCGTCACCT CGACCCCGAA ACCCTCGAGG TGCATGCGGC GCCGCGCGAG 
GGCACCGTGG CCGTTCACAT CTCCATCGAT GACGAGGAAG CCGCAGGCGA GGTCTGTCCA 
TCATGCGGCG CCCGAAACGC GATCCGGTAC ATGGGCTCGA GCGTCGCAAC CCTGCTCAGT 
GTCGGCCTCA CCACGGAGTT CGGTTCACGT CTGCTCCCTG ATGCGGAGAA GAAGACCCTG 
GTGTTCACCG ACTCAGTCCA GGACGCCGCC CACCGCGCCG CGTTCATCGA GGGCCGCGCC 
TTCGCGTTCA ACTTCCGCTC GGCTCTGTAC GCCTGTGTGG AGGACGGGAA CCGCACCCTC 
GCCGAGGTCG GGCAAGCACT CGCCACCCGG GCCACCACCG ACGAGCTGTA CGCCATCACC 
CCGCCCGATT TTGCCCGGCG CCTCACCACC GACGCCGACT GGCTGGACCA CGACGACGGG 
ACCCTGCGAC GAATCCTGGC CACCAGACTC GTTTTTCAGT CCCAACTCGA GGTCGGACTG 
GGCACACGCA CCGGCCGCAC ACTCGAACTC ACGTCCTCAC TAGCCGTCGA TGTCGACGTC 
GACCTGGCGT ATTTCGGCGC GGCTGCACGC GACGTCCACC AGAACCTGCC CCAGCTGAGC 
GTGACCGACC TCCCCGACGA CGCGTCCTAT CGCATCTGGC TGCTCGGACT CCTCGACCAC 
CTCAGGACCG GCGGTGGCAT CCTCCACCCG TGGCTGACGA CCTACATCAC GCAAGAGGGC 
AAGCGGTGGT CGATCTGGGG AGGTAGCGCC GACGGCATGC CCAAGTTCCC ACGCGGTCGA 
CCGGCACCGT CGTTCTACAC CACGGGTACC GCGGGAGAGA CCGACTTCCA ATCACTGAGT 
CCGCGTGGCG AATCCTGGCT GACCGACTGG ACCAAGAGAT GCCTGGGAGT CACCGCAGGC 
GAGGCGAGAG CCATGCTCAT GAGCGTCGTC GCCCTGCTCG CCGGCGACAA CGGACCCCTG 
CACGACCGCG CAGGAGAGAA AGGCGCGCGC ATCTTTGGCC TCGATCCGCA GTCGGTGACG 
CTCCACACCG ATGAGCTCGG GCGGCTGGTG TGCCCCACGT GCCACCACCT CCAACCATGC 
TCTGCCTCTC GCATCGAGAT CTGGGAGAAA GCACCGTGCC CCCGGATGCG GTGCACCGGA 
CGACTCGAAC CAGCCGAGAT CCCGGCCGCG AATTTCTACC GAACGATGTA CCGAGGCGGC 
CGCATCCGTC GCATCGTCAG TGCCGAACAC ACCGGCCTCC TGGGACGAGA CGAGCGTGAA 
GAGGTCGAAA CCCGATTCAA GGTCGGCGGC TCGGCGTCGG ATCCCAACAT CCTCGCGTGT 
ACACCGACAC TCGAACTAGG CATCGACATC GGAGATCTGA GCACCGTGTC GTTGGCCTCG 
CTGCCACGCT CGACTGCGGG CTACCTCCAG CGAGTCGGTC GTGCGGGCCG GTCCACTGGC 
AACGCATTCG TGTTCGCGGC GGTACCCACC TCACCTCGCG ACCTGTACTA CTTCGCCCAA 
CCCGAGCACC TTCTCGCCGG CGAGGTACTG CCACCCGGCG CGTATCTGGA GGCCACCGAA 
CTCCTGCAAC GCCAATACCT GGCATTCTGC CTCGACCGGA TCGCCGGCGG CGCTCTGCGT 
ATCGGGCCCC CGATGCCGGC GAGATTGGCC GACTGCCTCG ACAACGGGAT GGACGAGGGC 
CGATGGCTAC GTGGCGTCGT CGACACCTGC ACGGCCGGAG CCGCGAAGCT GTCCGCCGAC 
TTCCTGGGTC TCTTCGGCGA GCACCTCAGC GATCTCGCAC GAGAACAGTT GGGTGACTTC 
GCATCCGACG GCCTTCGTCT GCAGGTGGCA GCCGTCGCTG CGCGATGGGT GGAGGAGACC 
GACGAGATCC GGGACCGGAT GAGCGCCCTC TCGGAGGCGA TCGCCGTCCT CGACGGTCAC 
GGTCACCTCG ACGATGCCCA GCGCGAAGAC CGTAAGCGTT GCGCGGGCGA ATTCAAGGCC 
CTCTCGGACC AGCTCTACGA CCGCGCCACC ATCGAGACGT TGACCGGCCT CTCCGGGGTG 
GGGCTGTTGC CGAACTACAA CCTCCTCGAT GACTCCACGA CCCTCGACGT GCACCTCTGG 
TGGACCGTCG GACGAGAGGG CAACACCTCT CAAGGGGACA AACCCCAGAC CGAGGCCCTC 
GACCTCACCT ATGAGCGGGG CAGCTCCACC GCATTGACCG AACTCGCGCC CGGTGCCTAC 
TTCTACGCAG GCGGAAAGCG CGTCGAGATC GACGCCATGG ACATCGGGCC CGCAACCAAG 
CCGCACTGGC GTCGAACCCG ACTCTGTCCT GATTGTGGTT GGGGGACAAC CGACTCCGCA 
ACCGTACCGT CGTGCCCGCG TTGCCATTCC GGTGCGGTGT CTGATTCGGG TGCGGTCCAC 
AAGGTCCTCG AACTGCGCAA GGTGTCGGCG GTTCACCGAC TCGACGACGT CCTCATCGAC 
GAGGAGGTGG AGGACCGCAC GAGGACCTTC TTCGGCACCA TCACCGGTGT CGACATCGAA 
CCCAAGGACA TCAATCGGGC GTGGCGGCTC AAGAACACGG CGTTCGGAGC CGAGTATGCG 
CGGTCGGCGA CGATCAGGAC CGTCAACACC GGCTATGGCG ATGCGCCCGG CGAACAGATC 
ACCATCGCGG GCGAGGCCCG CACCGCACCG GGTTTCACCA CCTGTGAACA CTGCGGGGTG 
GTGGCGCCCG GACCCAACTC CACGGACAAG GTCCGCCACC GCGGCTATTG CGTCACCCGT 
CGAGGTGGGA CCGAGAAATG GACGCGCCTG CTGCTGTCGC ACGAACTGCG TACTCAGGCC 
GTCCGACTCC TGCTGCCCGT CTCGCTGCTG AACTTCGAGA CGACCCTCGC GTCGTTCAAG 
GGCGCTCTGC TCCTGGGACT GCGCAAGGAC TTCGGCGGTG ACCCGCAGCA CCTGGCGGTC 
GTGGCCTCCA GCATGAGCGA CACCCAAGGG GCCACCCGAC GGTTTCTCGT GCTGCACGAC 
ACGGTTCCCG GCGGAACGGG ATACCTCGAT AGGTTCGGCG ACCCACAACG CATGCATCAG 
ATTCTGTCCC TCGCCAGAGA CGCACTTGCA CAGTGCCCGT GCAGAACCGA AGAGCAGCAG 
GCATGCCACC GTTGCCTTTA CGGGGTTCTG CCGGCCCGGG ACATGGAACA CGCATCTCGC 
GAAGCCGCAT TACGGTTGAT CGAGGAGTTC CTCTCCGAGT GGGATGTCGA GAGTATCGGG 
ACGGTCACCG GAATCGACAT CGGCAAGGTG CAACTCAGTG AGCTGGAGAT CCGATTCCGC 
GAGTTGCTCA AGTCCCGGTT GGACGCGCGA GAAGGGGCGT CCTACGAGGT CGCGCTCGGA 
GGCAAGGGCG AGGAACTCGA CATCCGGATA CCGGCCCCAG ACGGTCGGAC GCGACGCTGG 
CGGATGCGTC CGCTGGTTCA GATGAGCCAC AGCGGCGTGG CGACCGAGCC AGACTTCCTG 
TTCACCCGCG TTGACGCCCA GACCGCCGAC GTCGCCATTT ATCTGGACGG CAAGCAGTTC 
CATGCGAGCG TCGAGCACAA TCGTACCGAC GACGATGCGC GCAAGCGTGA CGCGTTGCGC 
CGCTCCGACA TCCGGGTCTG GTCGATCTCA TGGGATGACG TCATCGCCGA TGAGACGGGC 
TCGGCCAAGC AGCGTTCCGC CGACATCGTC CACCAGCACA TCAAGAATCT CGTTGCCGAG 
AACGTGTCCG ACAACCGTGT GCGCCACATC TGGGCCAACC CCATCGAGTT CCTGCTCGAA 
TACATCGCCG ACCCCGACGC CACGGTCTGG GGAGAAGGGG CAGAGGCCAC CGTCTTCGAA 
TTGGTGACCG GCCCGGCAGA GCATGGCACC GCCCAGCACT TCCGGGTGGC ACCGTCGGAA 
CTGGCCACCG CTCTGATCGA CGCGGCCGCC GGGGCGGCGA TGACGGATGA CGAGACCGGC 
TCGGTCATGG TCGTTCCCCG CCACGGGCTC AGCGGTCTCC CACTGATCAT CTGCGCAGTG 
CCGGACTCCT TCCGGACCAC GCTCGGGGTG TTCACACTGC TCGACGACCG GGCGAACGTG 
GTCGGCGGAC CAGAGCACGA CGCACGGTGG CGGGCCTGGC TGCGGTGGTC CAACATCCTG 
CAGTTCCTCA CCCTGCCGCG CTACGGCGAC CTCATGCCCC AGCGCATGGC CGCGATATGG 
ACCACCAGGT CGGTCGACGA CTTCCTCGCC GTTCCGGTGC CGTTGGCGAT CACCGCAGGC 
GGTCGCGCCG ACATGATCAC CCCGCTGTCC GGAGAATGGG AGATCGTCCG CGAGTACGCC 
GATCCCGTCG TCGACGATCT CGTGACCGGT TTGGCCCAGG CCGGTCTCGA CGCCCCCGAG 
GTCGGATTGG AACTGGGCCC CGACGAGTCG ATCTGGCAGG TCGAATTGGG TTGGGAGGAA 
CCGAAGGTGG CCGTGGTGAC CGATGTCGAC GAGGCTCGCG AGGCATGGTT GGACGACAAC 
GGTTGGAAGG TGTTCCGCGT GGACACCACG ACAGGTGCCG GTGTGGACGA CGTCGCCACA 
TGTCTGACGG AAGGGACACG ATGA 

 

Protein sequence

MTLAQPSLPS LLAAETQESI VEYLTTTFAL SDPATQTALR DFLGDTDTGI FRGPYLKIRT 
PYQPVGDGWV SPLEWMPSGF RPFQHQAEAF ARLSTNGKAA QPTIVTTGTG SGKTESFLVP 
LLDHCKRAAA RGERGIKAII LYPMNALVTD QARRLADYLH GDERLAGVSA GVYIGGEGKR 
RHAGPHALID HRDTLRDNPP DILLTNYRML DLLLLRQADT RLWDNATTTL QYLVLDEFHT 
YDGAQGTDVA MLIRRLGSRL GLEGAAGPLG RVTPVATSAT LGGGSQSVEL RRFASTVFGS 
DFGSDSVVGE TSLAPIDVVR EVDFTLDIPS VAEILAVPEP VADDPASWEP LARTVLAGGQ 
SGAEDFSDPV TIGGALRRHF LTRVVIDVLG AQPRTVADAV LDVAQAGILP WGVHNSTAPR 
EAQTALLRFL ALLSIARVRD VSGSLRPLVN VQVQMWVREL SRMLRLVSDT PDFRWWHSGP 
AEGQRHLPAT YCRVCGRSGW MAATTELGDS LSGESPAIWR NSARSGSRAK NRVMLAANPA 
EDGVRHLDPE TLEVHAAPRE GTVAVHISID DEEAAGEVCP SCGARNAIRY MGSSVATLLS 
VGLTTEFGSR LLPDAEKKTL VFTDSVQDAA HRAAFIEGRA FAFNFRSALY ACVEDGNRTL 
AEVGQALATR ATTDELYAIT PPDFARRLTT DADWLDHDDG TLRRILATRL VFQSQLEVGL 
GTRTGRTLEL TSSLAVDVDV DLAYFGAAAR DVHQNLPQLS VTDLPDDASY RIWLLGLLDH 
LRTGGGILHP WLTTYITQEG KRWSIWGGSA DGMPKFPRGR PAPSFYTTGT AGETDFQSLS 
PRGESWLTDW TKRCLGVTAG EARAMLMSVV ALLAGDNGPL HDRAGEKGAR IFGLDPQSVT 
LHTDELGRLV CPTCHHLQPC SASRIEIWEK APCPRMRCTG RLEPAEIPAA NFYRTMYRGG 
RIRRIVSAEH TGLLGRDERE EVETRFKVGG SASDPNILAC TPTLELGIDI GDLSTVSLAS 
LPRSTAGYLQ RVGRAGRSTG NAFVFAAVPT SPRDLYYFAQ PEHLLAGEVL PPGAYLEATE 
LLQRQYLAFC LDRIAGGALR IGPPMPARLA DCLDNGMDEG RWLRGVVDTC TAGAAKLSAD 
FLGLFGEHLS DLAREQLGDF ASDGLRLQVA AVAARWVEET DEIRDRMSAL SEAIAVLDGH 
GHLDDAQRED RKRCAGEFKA LSDQLYDRAT IETLTGLSGV GLLPNYNLLD DSTTLDVHLW 
WTVGREGNTS QGDKPQTEAL DLTYERGSST ALTELAPGAY FYAGGKRVEI DAMDIGPATK 
PHWRRTRLCP DCGWGTTDSA TVPSCPRCHS GAVSDSGAVH KVLELRKVSA VHRLDDVLID 
EEVEDRTRTF FGTITGVDIE PKDINRAWRL KNTAFGAEYA RSATIRTVNT GYGDAPGEQI 
TIAGEARTAP GFTTCEHCGV VAPGPNSTDK VRHRGYCVTR RGGTEKWTRL LLSHELRTQA 
VRLLLPVSLL NFETTLASFK GALLLGLRKD FGGDPQHLAV VASSMSDTQG ATRRFLVLHD 
TVPGGTGYLD RFGDPQRMHQ ILSLARDALA QCPCRTEEQQ ACHRCLYGVL PARDMEHASR 
EAALRLIEEF LSEWDVESIG TVTGIDIGKV QLSELEIRFR ELLKSRLDAR EGASYEVALG 
GKGEELDIRI PAPDGRTRRW RMRPLVQMSH SGVATEPDFL FTRVDAQTAD VAIYLDGKQF 
HASVEHNRTD DDARKRDALR RSDIRVWSIS WDDVIADETG SAKQRSADIV HQHIKNLVAE 
NVSDNRVRHI WANPIEFLLE YIADPDATVW GEGAEATVFE LVTGPAEHGT AQHFRVAPSE 
LATALIDAAA GAAMTDDETG SVMVVPRHGL SGLPLIICAV PDSFRTTLGV FTLLDDRANV 
VGGPEHDARW RAWLRWSNIL QFLTLPRYGD LMPQRMAAIW TTRSVDDFLA VPVPLAITAG 
GRADMITPLS GEWEIVREYA DPVVDDLVTG LAQAGLDAPE VGLELGPDES IWQVELGWEE 
PKVAVVTDVD EAREAWLDDN GWKVFRVDTT TGAGVDDVAT CLTEGTR