| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_0231 |
|---|
| Symbol | |
|---|
| ID | 8549558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 252084 |
|---|
| End bp | 253112 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | helix-turn-helix- domain containing protein AraC type |
|---|
| Protein accession | YP_003271469 |
|---|
| Protein GI | 262200261 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.13333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTG ATGCACGAAT GGTTGTCTCG GACTGCATGA CCGCCCCGAC ATCCGCGGTG
GAGCTGAACA CCCGGGAGTA CCGGCCGGAG AAGGCACGTG AACTCTGGTC GCAGACACTC
GATTCGACGT ACTGCGAGAT GGATGTGGTG TGGCCTGGAT CCCCGGTGGG CGCCGCTGAT
TTCGGTGCGG AGATCGTCGC ACGGCAGGCG GGGGAACTAT CGCTGAGTGT GGTGCGCGCC
GATCCGCATA CCGTGGTCCG GACGCCGGCG ATGATCGCCT CCGACCCGGG CGACGATCTT
CTGCTCTGCC TCATCACCCG GGGCCGGGCA AGTATTGTGC AGCAGGGTCA TTCGGGGGTG
CTCTCGGACG GCTCATTCGG GTTCGTCGAC GCGTCGATGC CGTTCACGGT TGCCGGTGAA
ACACCCTTCG AACAAGTGGT GGTGCGAATT CCGCGGGCCA CCCTGGCGGG ACGGTTGCCG
GCGGCCGTGG TCGACGACTC CCTCGGACGG TCCATCTCCG GGACGGAGGG CATCGGACGG
GTCGCGTCGC GCCTACTGGT GGACCTGGCG ATGCATGACG ACCGGCTCGA CGAAGGATCG
TGGGCCGGTG TTGCCACCGC CGTCCTGGAG GTCGTCTCGG CGTCGGTGCA GCAATGCTCT
ACCCACCTGT CGGCGACGCA ACAGTCACAC ACCGACGACC TGAGTGCGAT CCAGCGGGTG
CTGTTGCGTG ACATCGCGGA TCCCGATCGG ACCCTCGCCG ACGTCGGCGC CGAACTCGGG
ATGTCGGTGC GCTACATCCA CAAGCTGTTC AGCGCAAGCG GGACCACGCC GCGAGCCTGG
CTCTACGCGC GTCGCCTGGA TCGCGCGAGA ACACTTCTGC TGCAGTCGGA AATCACATGC
GCGAACCTCA GCGAGCAGCT CGGCTTCCGG GATGTCTCAC ACTTCAGCAG AGCATTCCGC
AAGCAGTTCG GCATCAGTCC GGGACGTTAC CGGCTCATCC CAATCGGGGG TGTAGGAGTT
GGGGTCTGA
|
|---|
| Protein sequence | MTVDARMVVS DCMTAPTSAV ELNTREYRPE KARELWSQTL DSTYCEMDVV WPGSPVGAAD
FGAEIVARQA GELSLSVVRA DPHTVVRTPA MIASDPGDDL LLCLITRGRA SIVQQGHSGV
LSDGSFGFVD ASMPFTVAGE TPFEQVVVRI PRATLAGRLP AAVVDDSLGR SISGTEGIGR
VASRLLVDLA MHDDRLDEGS WAGVATAVLE VVSASVQQCS THLSATQQSH TDDLSAIQRV
LLRDIADPDR TLADVGAELG MSVRYIHKLF SASGTTPRAW LYARRLDRAR TLLLQSEITC
ANLSEQLGFR DVSHFSRAFR KQFGISPGRY RLIPIGGVGV GV
|
|---|
| |