Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_0215 |
Symbol | |
ID | 8549542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 231835 |
End bp | 237114 |
Gene Length | 5280 bp |
Protein Length | 1759 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Beta-ketoacyl synthase |
Protein accession | YP_003271455 |
Protein GI | 262200247 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAAC TGAATACCGA CCAGTCCGAG AACACCCCCG ACGACGCCGC GACGCAACCG GCGGACGGGG CGAGCACAGA CGGCGAGACC GCAGGCGACC TGACGGTCGC CGAACTGCGT GACTGGCTTC GTGAATGGGT GTCCACCGCG ACCGGGTTGC CGGCCGCGCA GATCTCCGAC GACCGCCCGA TGGAAGAGTT CGGGCTGTCG TCGCGGGATG CGGTGGCGCT GGCCGCCGAC GTCGAGGACA AGACCGGCGT GATCCTGACG GCGACCGCCG CCTACAACCA TCCGACCATC GCGATGCTGG CCAAACGCAT CATCGAGGGT GACCCGGATG AGGGGCTCGA CGACGACGAC GCCGACTCCT ACTGGCGGCG TGAGCGCGAC CCGGCCGACG ACATCGCCAT CGTCGGGCTG TCCACCCGCT TTCCCAAGGC GGGTGCCACG CCGGAGTCCA CCTGGGCGGC GTTGATCGAG GGACGCGACG GCATCTCCGA TCTGCCGGAG GACCGCTGGA CGGAGTTCAA GTCCGATCCG CGCATGCTCG AGGTGCTCGA GAAGCGCAAT CTGCGCGGCG GCTACCTCGA CGACGTGAAG GCCTTCGACG CCGACTTCTT CCAGATGAGT CCGCGCGAGG TCGAGATGGT GGACCCGCAG CAGCGGCTCG CACTGGAACT CACCTGGGAA GCGCTGGAAG ACGCGCACAT CCCGGCCAGC GACCTCAAGG GCGGGCAGGT CGGCGTCTTC GTCGGCACTT CCACCAACGA CTATCAGCTG ATGGCCGCCC TCGGCCTCGG CGAGGGGTCC GACGAGACCG CGGCGTACGC GCTGACCGGC ACCGCGACAT CGATCATCGC CAACCGTGTC TCCTACTTCT TCGACTTCCA CGGCCCGTCG GTCGCGGTGG ACACCGCCTG CTCGTCGTCG CTGGTGGCGG TCCATCAGGC GGTGCGCAGC CTACGTTCGG GCGAATCCGA CGTGGCGTTG GCCGGCGGCG TCAACATGAT CCTGACCCCC GCCGCGACGG TCGGGTTCGA CACCATCGGC GCCGTCGCCA AGGACGGGCA CATCAAGGCG TTCTCCGCCG ACGCCGACGG CATGGTCCGC TCCGAGGGCG GTGGCATGTT CGTCCTCAAG CGGCTCGCCG ACGCTCGCCG CGACGGCGAC GACGTCCTCG CGGTGATCGC CGGTTCCGCG GTCAACTCCG ACGGCCGGTC CAACGGCATC TTCGCGCCCA ATCCCGAAGC GCAGGTGGAG GTTCTGCGGT CGGCGTATGT CGACGCGGCC ACCGATCCGC GTCAGGTGGA TTACGTGGAG GCGCACGGTA CCGGCACCAT TCTCGGTGAC CCCATCGAGG CCGACGCGCT GGGCCGCGTG GTGGGTCGCG GGCGCGTCGT CGGCGCGCCG GCGCTGCTCG GCTCGGCCAA GACCAACTTC GGGCACATGG AATCCGCCGC GGGTGCGGGT GCGTTGGCCA AGGTGGTGCT CTCCTTGCAG CACAACGTGA TCCCGCCATC ACTGAACTAT TCGGGACCCA ACCCGTACAT CCAGTTCGGT GCCAACGGAT TGCAGGTGAC CGACCAGGTC GCCGAGTGGC CGCGCTATTC CGGCCACGCC ATCGCCGGCG TGTCCGGCTT CGGCTTCGGC GGCACCAACG CCCATCTCGT GGTCCGTGAG GTCCTGCCCA CCGATCTCGT GGACGACGCG CCGGTCCTCC CGGTCGTCGA CGCGGCCGCC GCCGAGACAC CGGCCGCCGA CCTCGACGAC GACGAGGATT TCCTCACCGA GGCCGAACGC GCCGTACTTG CCGCGCAGGC CGGCGCCGGG CAGACCGAAA CCGTTGTGGC GGAGAAAGAC CCGGCTGCGG GGTTCGCGCC GTGCGCGGTC GAGGGCGCGG TGGTCCCGCT GGTGATCTCG GCCTTCCTGC CGTCGCGTCG CCGCAAGGCC GCCGCCGATC TGCTGGAGTG GCTGGAATCG GATGCGGGAC AGTCGACCCC GCTCGCAGAC ATCGGTCGCG CCCTGTCCCG CCGCAATCAC GGTCGGTCGC GTGCAGTGGT GATGGCCCGC ACCCACGACG ATGCGGTGAA GGGCGTGCGT GCGGTGGCCG AGGGCAAGGC CAATCCGATT GTGTACTCGG CTGATTCGCC GGATGCCGCG TCGGCGGTGT GGTTGCTGTC GGGTTTCGGG TCGCAGCACC GCAAGATGGC CAAGCAGCTG TATCAGGAGA ACCCGGTCTT CGCCAAGTAC GTCGACCGCG TCGATGAGTA CGTCCAGAAC GAGCTGGGCT ACTCGATCAC CGAGATGTTC CTCGACGACG CGCAGACCTA TGGCATCGAG ACCAGTCAGG TCGGCATCTA CACGATTCAG GTGGCTCTCG CGGACACATT GCGCCACTTC GGTGCCGAAC CCGGTGTGCT GGTACCGCAT TCGATGGGAG AGGCGTCGGC CGCCTACATC AGCGGCGGAC TCTCGCTGGC GGACGCGACC CGCGTCATCT GCCAGCGTTC GCGACTGATG GGCGAGGGCG AGTCGATGCT CGCCGGCGAC GACATCCGGC TGATGGCGCT CGTGGAGTAC AGCGCCGAGG ACATCAACGA CGTCCTGGTC GACTATCCCG ACCTGGAGAT CTGCGTGTAC GCCGCCCCGA CCCACACCGT GATCGGTGGG CCCGAGCCGC AGGTCGACGC CATCGTCGAG CGCGCCGAGG AGGAAGGGAA ACTCGGCCGC AAACTGCAGA CCAAGGGTGC CAGCCACACC TCGCAGATGG ACCCGCTGCT CGGCGAACTC GCCTACGAGC TCACCGGTAT CGAGCCGCAG CGCCCGACCG TCGGGTTCTA CAGCTCCGTC GACCGCGAGA CCTTCTACCG GCCGGGCCAC GAGCCGGTGC ACACCATCGA CTACTTCCTC AAGGGTCTGC GGCACAGTGT GTGGTTCTCC CAGGCGATCT CGAAGTCGGT GGAGAACGGT CACCGCACCT ACCTGGAGCT CTCGCCGAAC CCGGCCGTGC TGATCTCCGT TGCCGCCGTG ACCTTCTCGT CCGGTGTGCA CGACGCCGAA CTCATCGAGA CCTTGCGTCG CAAGGAAGAC GAGAGCTACG GCCTGGTCAA CGCGCTGATG AAGCTGTACG TCCACGGACA TCCGGTGAAC GTCGGATCAC TTTTCGGCAC AGGCGATTTC GCGGACATCC CGCGGACACG CTTCGAGCGT AAGCCCTACT GGCTGACCGC TGACCTGTCC TCCGGCGGTT CGGCCGGCCG CGCGCCCGGG TCGCATGTTG CCCTGCCCGA CGGCCGGCAC GCTTGGGAGG TGAATGCCGC CGCCGTCACC GATCCGCGTG AGCTGGTGCG GGCGGCTGCC GCCGAGGTGC TCTCCGGAGC GTCCGTCGGC GCGGCGGTGT CACACGGCGC CCTCCCGGCG TCCGGCACGG TCACCACCAC GCTGGCCCCC CACCCCGGCG GCGCGTCGGT GACGGTCCAT GTCAAGCAGG ACAAGAACTT CCGGCTGCTC TTCGAGGCCG CCGTCACCGG TGATCCCGCC GAGGGCACCA CCATTCCCGC CGACAGCACC GCGAGTCTCG CCGACGGCAC CGTGAATCTC GCCGACAGCA CCGGCGCGGC GGTGTTCGCC GACGACAAGG TCGTGGTCGA GGACGAGATC GTCGACGACA TCGGCAACAA GTGGTCGCCG GATTCCGCTG AGTCCGTGGC CGATCGGCTC GCGATCATCG TCGGCGAATC GATGGGTTAC GACCCCGAGG ACCTGCCGCG GGAGATCCCG CTCATCGAGC TGGGACTCGA CTCGCTGATG GCGGTGCGGA TCAAGAACCG CGTCGAGTAC GAGTTCGACA TCCCGCAGCT GCAACTGCAG GCGATGCGCC AGGCCAACCT CGACGACGTG ACGAAGTTCG TGGAGTTCGC GGTGACCCAC CGCGATCAGC TCGACGACCT GGCCCAGAAC GCCGCGGGCG GCGGAGAGCT CGACACCGCG GCCCTCAACG CCTACATCGA CGAGCAGAAC GCGAAGCAGG CCGAGGCACC CGCCCCGACC CCCGCTGATC GTGCGCCCGA TCCCGTTGAT CGTGCGCCCG ATCCCGTTGA TCGTGCGCCC GATCCCGTTG ATCGTGCGCC TGAAGCCACG GATCTCACCG ATCAGCGCGC GGTCGCCGAG GCTGCCGGCT CGGACGTGCC CCCGCGCGAC GCCGCGGAAC GGTTGACCTT CGGGGTATAC GCGATGGTGA CCAAGCGGTC GGCGGGCGGC ATCTTCAACA AGCTGCCTGT GCTGGAAGAA GAAGTGGCGC AGCAACTCAC CGATCGCCTG AATGAGCGCG CCGGCGGCGA CATCGATCTC GAGGACATCC TGGACTCGGA GACCATCGAG GAGATGTCGG ACTACGTCCG GCAGTACCTC GACGCCTCCG CCGACACCGA CGGTTTCCTG CGCTACCTGC GGCTGGTGCC GGACGGCAAG AAGTCCTATG ACCCGACGGT GGGTGATCCG ACGCCGATCC TGCTGTTCCA TCCGGCCGGT GGTAACACGT CGGCCTACGA GGCGCTGCTC AAGCGATTGC CGGCGGACCG GCCGGTCATC GGTTTCGACC GTGGTGTCGA GGGCTCCATC GAAGATCGTG TGCGCAAGTA CATTCCGCGC CTGCGCGAGG TTCAGCCGCA TGGGCCGTAT GTGCTCGTCG GCTGGTCGTT CGGCGGCGCA CTGGCCTACG GCGTCGCCCA GGTGCTGCGC GACGCGGGCG AGGAAGTGGC CTTCGTCGGC CTGATCGACG TGGTGCGGCC CCGCCAGGAC ATGATCGAGA CCGCCGACAC CAAACGCGAA CGGCTGGAAC GATGGAAGGA TTTCGCGATC CGCAACTACG ATCTCGACCC CGACATCCCG ATCCCGATGG ATCGGCTCGT CGAGGCCGAC GACGAGGGGC AGTTCGCGAT CATCATGGAG ATGATGTCGA TGTCGGGCAC CAAGATCCCC GGCGGCATCA TCGAGCATCA ACGCACCTCG TTCATCGAGA ACCGCGCGCT GACCAACATT TCGCCTGCAC CGTACGGCGG CAAGGTGGTT CTGTACCGCG CCGACAAGAT GCATGCGGGG GCAATCGAAC TCGAGCCGCA ATGGGCCGAG ATCGACGAGG ACGGGCGCTG GCGTGAGGTG GTCGACGATC TGGAGATCAT CCACATCGGT GGTGACCACC TGTCCATCGT CGACGAACCG TACGTCGCCA AGATCGGGAC CGACCTGGCC CAGCGGCTGA GCGAGCTCGA CAAGAAGTAG
|
Protein sequence | MSELNTDQSE NTPDDAATQP ADGASTDGET AGDLTVAELR DWLREWVSTA TGLPAAQISD DRPMEEFGLS SRDAVALAAD VEDKTGVILT ATAAYNHPTI AMLAKRIIEG DPDEGLDDDD ADSYWRRERD PADDIAIVGL STRFPKAGAT PESTWAALIE GRDGISDLPE DRWTEFKSDP RMLEVLEKRN LRGGYLDDVK AFDADFFQMS PREVEMVDPQ QRLALELTWE ALEDAHIPAS DLKGGQVGVF VGTSTNDYQL MAALGLGEGS DETAAYALTG TATSIIANRV SYFFDFHGPS VAVDTACSSS LVAVHQAVRS LRSGESDVAL AGGVNMILTP AATVGFDTIG AVAKDGHIKA FSADADGMVR SEGGGMFVLK RLADARRDGD DVLAVIAGSA VNSDGRSNGI FAPNPEAQVE VLRSAYVDAA TDPRQVDYVE AHGTGTILGD PIEADALGRV VGRGRVVGAP ALLGSAKTNF GHMESAAGAG ALAKVVLSLQ HNVIPPSLNY SGPNPYIQFG ANGLQVTDQV AEWPRYSGHA IAGVSGFGFG GTNAHLVVRE VLPTDLVDDA PVLPVVDAAA AETPAADLDD DEDFLTEAER AVLAAQAGAG QTETVVAEKD PAAGFAPCAV EGAVVPLVIS AFLPSRRRKA AADLLEWLES DAGQSTPLAD IGRALSRRNH GRSRAVVMAR THDDAVKGVR AVAEGKANPI VYSADSPDAA SAVWLLSGFG SQHRKMAKQL YQENPVFAKY VDRVDEYVQN ELGYSITEMF LDDAQTYGIE TSQVGIYTIQ VALADTLRHF GAEPGVLVPH SMGEASAAYI SGGLSLADAT RVICQRSRLM GEGESMLAGD DIRLMALVEY SAEDINDVLV DYPDLEICVY AAPTHTVIGG PEPQVDAIVE RAEEEGKLGR KLQTKGASHT SQMDPLLGEL AYELTGIEPQ RPTVGFYSSV DRETFYRPGH EPVHTIDYFL KGLRHSVWFS QAISKSVENG HRTYLELSPN PAVLISVAAV TFSSGVHDAE LIETLRRKED ESYGLVNALM KLYVHGHPVN VGSLFGTGDF ADIPRTRFER KPYWLTADLS SGGSAGRAPG SHVALPDGRH AWEVNAAAVT DPRELVRAAA AEVLSGASVG AAVSHGALPA SGTVTTTLAP HPGGASVTVH VKQDKNFRLL FEAAVTGDPA EGTTIPADST ASLADGTVNL ADSTGAAVFA DDKVVVEDEI VDDIGNKWSP DSAESVADRL AIIVGESMGY DPEDLPREIP LIELGLDSLM AVRIKNRVEY EFDIPQLQLQ AMRQANLDDV TKFVEFAVTH RDQLDDLAQN AAGGGELDTA ALNAYIDEQN AKQAEAPAPT PADRAPDPVD RAPDPVDRAP DPVDRAPEAT DLTDQRAVAE AAGSDVPPRD AAERLTFGVY AMVTKRSAGG IFNKLPVLEE EVAQQLTDRL NERAGGDIDL EDILDSETIE EMSDYVRQYL DASADTDGFL RYLRLVPDGK KSYDPTVGDP TPILLFHPAG GNTSAYEALL KRLPADRPVI GFDRGVEGSI EDRVRKYIPR LREVQPHGPY VLVGWSFGGA LAYGVAQVLR DAGEEVAFVG LIDVVRPRQD MIETADTKRE RLERWKDFAI RNYDLDPDIP IPMDRLVEAD DEGQFAIIME MMSMSGTKIP GGIIEHQRTS FIENRALTNI SPAPYGGKVV LYRADKMHAG AIELEPQWAE IDEDGRWREV VDDLEIIHIG GDHLSIVDEP YVAKIGTDLA QRLSELDKK
|
| |